Cluster: PUL0718_HRGMv2_3983_C5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate: alginate
- Genome ID: HRGMv2_3983
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_89 | 149138 | 149857 | - | GntR |
| TC | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_90 | 150134 | 153253 | + | 1.B.14.6.1 |
| TC | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_91 | 153267 | 154784 | + | 8.A.46.1.5 |
| CAZyme | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_93 | 156495 | 158759 | + | PL6 | PL6_1 |
| CAZyme | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_94 | 158804 | 161011 | + | PL17_2 | PL17_2 |
| STP | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_95 | 161035 | 161379 | + | AraC_binding |
| TC | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_96 | 161384 | 162850 | + | 2.A.1.14.25 |
| pfam | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_97 | 162875 | 163627 | + | adh_short | KR | adh_short_C2 | SDR |
| CAZyme | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_98 | 163715 | 164917 | + | PL38 |
| peptidase | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_99 | 164966 | 165955 | + | S09.UPB |
| NULL(UNKNOWN) | PUL0718_HRGMv2_3983_C5 | HRGMv2_3983_8_100 | 165962 | 166849 | + | NULL(UNKNOWN) |
Gene ID: HRGMv2_3983_8_89
Type: TF
Location: 149138 - 149857 (-)
Type: TF
Location: 149138 - 149857 (-)
Gene ID: HRGMv2_3983_8_90
Type: TC
Location: 150134 - 153253 (+)
Type: TC
Location: 150134 - 153253 (+)
Gene ID: HRGMv2_3983_8_91
Type: TC
Location: 153267 - 154784 (+)
Type: TC
Location: 153267 - 154784 (+)
Gene ID: HRGMv2_3983_8_93
Type: CAZyme
Location: 156495 - 158759 (+)
Type: CAZyme
Location: 156495 - 158759 (+)
Gene ID: HRGMv2_3983_8_94
Type: CAZyme
Location: 158804 - 161011 (+)
Type: CAZyme
Location: 158804 - 161011 (+)
Gene ID: HRGMv2_3983_8_95
Type: STP
Location: 161035 - 161379 (+)
Type: STP
Location: 161035 - 161379 (+)
Gene ID: HRGMv2_3983_8_96
Type: TC
Location: 161384 - 162850 (+)
Type: TC
Location: 161384 - 162850 (+)
Gene ID: HRGMv2_3983_8_97
Type: pfam
Location: 162875 - 163627 (+)
Type: pfam
Location: 162875 - 163627 (+)
Gene ID: HRGMv2_3983_8_98
Type: CAZyme
Location: 163715 - 164917 (+)
Type: CAZyme
Location: 163715 - 164917 (+)
Gene ID: HRGMv2_3983_8_99
Type: peptidase
Location: 164966 - 165955 (+)
Type: peptidase
Location: 164966 - 165955 (+)
Gene ID: HRGMv2_3983_8_100
Type: null
Location: 165962 - 166849 (+)
Type: null
Location: 165962 - 166849 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Composition
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