Cluster: PUL0705
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate: xylan
- Genome ID: PUL0705
- CGC Family ID: CGCFAM_00238
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_JPOL01000002 | P162_RS17810 | 1 | 2769 | - | CBM91 | GH43_10 |
| CAZyme | NZ_JPOL01000002 | P162_RS04020 | 3313 | 5274 | - | GH97 |
| CAZyme | NZ_JPOL01000002 | P162_RS04025 | 5306 | 7060 | - | CBM91 | GH43_12 |
| CAZyme | NZ_JPOL01000002 | P162_RS04030 | 7255 | 9939 | - | CE1 | CE1 | CE6 |
| CAZyme | NZ_JPOL01000002 | P162_RS04035 | 10006 | 11304 | - | GH8 |
| CAZyme | NZ_JPOL01000002 | P162_RS04040 | 11358 | 13862 | - | GH95 |
| TF | NZ_JPOL01000002 | P162_RS04045 | 14480 | 18559 | + | HTH_AraC | HTH_AraC |
| CAZyme | NZ_JPOL01000002 | P162_RS04050 | 18932 | 20071 | - | GH10 |
| CAZyme | NZ_JPOL01000002 | P162_RS04055 | 20269 | 21957 | - | GH10 |
| pfam | NZ_JPOL01000002 | P162_RS04060 | 21993 | 23027 | - | BT_3987-like_N | DUF5627 |
| pfam | NZ_JPOL01000002 | P162_RS04065 | 23070 | 24812 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_JPOL01000002 | P162_RS04070 | 24840 | 27893 | - | 1.B.14.6.1 |
| pfam | NZ_JPOL01000002 | P162_RS04075 | 27956 | 29848 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_JPOL01000002 | P162_RS04080 | 29860 | 33054 | - | 1.B.14.6.1 |
Gene ID: P162_RS17810
Type: CAZyme
Location: 1 - 2769 (-)
Type: CAZyme
Location: 1 - 2769 (-)
Gene ID: P162_RS04020
Type: CAZyme
Location: 3313 - 5274 (-)
Type: CAZyme
Location: 3313 - 5274 (-)
Gene ID: P162_RS04025
Type: CAZyme
Location: 5306 - 7060 (-)
Type: CAZyme
Location: 5306 - 7060 (-)
Gene ID: P162_RS04030
Type: CAZyme
Location: 7255 - 9939 (-)
Type: CAZyme
Location: 7255 - 9939 (-)
Gene ID: P162_RS04035
Type: CAZyme
Location: 10006 - 11304 (-)
Type: CAZyme
Location: 10006 - 11304 (-)
Gene ID: P162_RS04040
Type: CAZyme
Location: 11358 - 13862 (-)
Type: CAZyme
Location: 11358 - 13862 (-)
Gene ID: P162_RS04045
Type: TF
Location: 14480 - 18559 (+)
Type: TF
Location: 14480 - 18559 (+)
Gene ID: P162_RS04050
Type: CAZyme
Location: 18932 - 20071 (-)
Type: CAZyme
Location: 18932 - 20071 (-)
Gene ID: P162_RS04055
Type: CAZyme
Location: 20269 - 21957 (-)
Type: CAZyme
Location: 20269 - 21957 (-)
Gene ID: P162_RS04060
Type: pfam
Location: 21993 - 23027 (-)
Type: pfam
Location: 21993 - 23027 (-)
Gene ID: P162_RS04065
Type: pfam
Location: 23070 - 24812 (-)
Type: pfam
Location: 23070 - 24812 (-)
Gene ID: P162_RS04070
Type: TC
Location: 24840 - 27893 (-)
Type: TC
Location: 24840 - 27893 (-)
Gene ID: P162_RS04075
Type: pfam
Location: 27956 - 29848 (-)
Type: pfam
Location: 27956 - 29848 (-)
Gene ID: P162_RS04080
Type: TC
Location: 29860 - 33054 (-)
Type: TC
Location: 29860 - 33054 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavimarina
Species
Flavimarina sp. Hel_I_48
Gene Composition
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