Cluster: PUL0704
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 7
- Substrate: xylan
- Genome ID: PUL0704
- CGC Family ID: CGCFAM_00044
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NZ_JPOL01000002 | P162_RS02310 | 1 | 1467 | - | 8.A.46.1.3 |
| TC | NZ_JPOL01000002 | P162_RS02315 | 1480 | 4503 | - | 1.B.14.6.1 |
| pfam | NZ_JPOL01000002 | P162_RS02320 | 4819 | 6312 | - | FGGY_N | FGGY_C |
| TF | NZ_JPOL01000002 | P162_RS02325 | 6524 | 7585 | + | LacI |
| CAZyme | NZ_JPOL01000002 | P162_RS02330 | 7810 | 9984 | + | GH67 |
| CAZyme | NZ_JPOL01000002 | P162_RS02335 | 10063 | 11187 | + | GH10 |
| CAZyme | NZ_JPOL01000002 | P162_RS02340 | 11192 | 14038 | + | GH115 | GH115 |
| CAZyme | NZ_JPOL01000002 | P162_RS02345 | 14404 | 16599 | - | GH10 |
| pfam | NZ_JPOL01000002 | P162_RS02350 | 16664 | 18025 | - | SGBP_B_XBD |
| pfam | NZ_JPOL01000002 | P162_RS02355 | 18067 | 19698 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_JPOL01000002 | P162_RS02360 | 19709 | 22870 | - | 1.B.14.6.1 |
| CAZyme | NZ_JPOL01000002 | P162_RS02365 | 23487 | 25862 | - | CBM9 | CE15 |
| pfam | NZ_JPOL01000002 | P162_RS02370 | 26128 | 28080 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_JPOL01000002 | P162_RS02375 | 28091 | 31162 | - | 1.B.14.6.1 |
| CAZyme | NZ_JPOL01000002 | P162_RS02380 | 31840 | 32955 | + | GH43_1 |
| CAZyme | NZ_JPOL01000002 | P162_RS02385 | 32966 | 34888 | + | CE20 | CE20 |
| TC | NZ_JPOL01000002 | P162_RS02390 | 34988 | 36703 | - | 8.A.46.1.3 |
| pfam | NZ_JPOL01000002 | P162_RS02395 | 37061 | 40381 | - | Por_Secre_tail |
Gene ID: P162_RS02310
Type: TC
Location: 1 - 1467 (-)
Type: TC
Location: 1 - 1467 (-)
Gene ID: P162_RS02315
Type: TC
Location: 1480 - 4503 (-)
Type: TC
Location: 1480 - 4503 (-)
Gene ID: P162_RS02320
Type: pfam
Location: 4819 - 6312 (-)
Type: pfam
Location: 4819 - 6312 (-)
Gene ID: P162_RS02325
Type: TF
Location: 6524 - 7585 (+)
Type: TF
Location: 6524 - 7585 (+)
Gene ID: P162_RS02330
Type: CAZyme
Location: 7810 - 9984 (+)
Type: CAZyme
Location: 7810 - 9984 (+)
Gene ID: P162_RS02335
Type: CAZyme
Location: 10063 - 11187 (+)
Type: CAZyme
Location: 10063 - 11187 (+)
Gene ID: P162_RS02340
Type: CAZyme
Location: 11192 - 14038 (+)
Type: CAZyme
Location: 11192 - 14038 (+)
Gene ID: P162_RS02345
Type: CAZyme
Location: 14404 - 16599 (-)
Type: CAZyme
Location: 14404 - 16599 (-)
Gene ID: P162_RS02350
Type: pfam
Location: 16664 - 18025 (-)
Type: pfam
Location: 16664 - 18025 (-)
Gene ID: P162_RS02355
Type: pfam
Location: 18067 - 19698 (-)
Type: pfam
Location: 18067 - 19698 (-)
Gene ID: P162_RS02360
Type: TC
Location: 19709 - 22870 (-)
Type: TC
Location: 19709 - 22870 (-)
Gene ID: P162_RS02365
Type: CAZyme
Location: 23487 - 25862 (-)
Type: CAZyme
Location: 23487 - 25862 (-)
Gene ID: P162_RS02370
Type: pfam
Location: 26128 - 28080 (-)
Type: pfam
Location: 26128 - 28080 (-)
Gene ID: P162_RS02375
Type: TC
Location: 28091 - 31162 (-)
Type: TC
Location: 28091 - 31162 (-)
Gene ID: P162_RS02380
Type: CAZyme
Location: 31840 - 32955 (+)
Type: CAZyme
Location: 31840 - 32955 (+)
Gene ID: P162_RS02385
Type: CAZyme
Location: 32966 - 34888 (+)
Type: CAZyme
Location: 32966 - 34888 (+)
Gene ID: P162_RS02390
Type: TC
Location: 34988 - 36703 (-)
Type: TC
Location: 34988 - 36703 (-)
Gene ID: P162_RS02395
Type: pfam
Location: 37061 - 40381 (-)
Type: pfam
Location: 37061 - 40381 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavimarina
Species
Flavimarina sp. Hel_I_48
Gene Composition
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