Cluster: PUL0701
🧬 Cluster Details
- Gene Count: 31
- CAZyme Count: 8
- Substrate: beta-glucan
- Genome ID: PUL0701
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | NC_003919 | XAC_RS21315 | 1 | 1338 | + | NULL(UNKNOWN) |
| TF | NC_003919 | XAC_RS21320 | 1552 | 2568 | - | LacI |
| NULL(UNKNOWN) | NC_003919 | XAC_RS26510 | 2477 | 2683 | + | NULL(UNKNOWN) |
| CAZyme | NC_003919 | XAC_RS21325 | 2802 | 4997 | + | GH67 |
| CAZyme | NC_003919 | XAC_RS21330 | 4994 | 6958 | + | CE20 | CE20 |
| pfam | NC_003919 | XAC_RS21335 | 6970 | 8229 | + | MR_MLE_N | MR_MLE_C |
| CAZyme | NC_003919 | XAC_RS21340 | 8253 | 9923 | + | CBM91 | GH43_12 |
| CAZyme | NC_003919 | XAC_RS21345 | 9926 | 12631 | + | GH3 |
| pfam | NC_003919 | XAC_RS21350 | 12781 | 14253 | + | Mannitol_dh | Mannitol_dh_C |
| STP | NC_003919 | XAC_RS21355 | 14335 | 14724 | - | Glyoxalase |
| pfam | NC_003919 | XAC_RS24580 | 15062 | 15220 | + | DUF2256 |
| NULL(UNKNOWN) | NC_003919 | XAC_RS21360 | 15445 | 15966 | + | NULL(UNKNOWN) |
| pfam | NC_003919 | XAC_RS21370 | 16518 | 17540 | + | Kelch_1 | Kelch_1 | Kelch_2 | Kelch_6 | Kelch_6 | Kelch_6 | Kelch_KLHDC2_KLHL20_DRC7 | Beta-prop_ATRN-LZTR1 |
| STP | NC_003919 | XAC_RS21375 | 17674 | 18420 | - | TetR_N |
| pfam | NC_003919 | XAC_RS21380 | 18632 | 20068 | - | Aldedh |
| pfam | NC_003919 | XAC_RS21385 | 20171 | 21313 | - | MFS_1 |
| NULL(UNKNOWN) | NC_003919 | XAC_RS21390 | 21392 | 22033 | - | NULL(UNKNOWN) |
| pfam | NC_003919 | XAC_RS21400 | 23498 | 24178 | - | Aldolase_II |
| pfam | NC_003919 | XAC_RS21405 | 24165 | 25811 | - | FGGY_N | FGGY_C |
| pfam | NC_003919 | XAC_RS21410 | 25811 | 26728 | - | Gcw_chp |
| pfam | NC_003919 | XAC_RS21415 | 26811 | 27257 | - | DUF2147 |
| NULL(UNKNOWN) | NC_003919 | XAC_RS25375 | 27314 | 27652 | + | NULL(UNKNOWN) |
| sulfatase | NC_003919 | XAC_RS21430 | 27945 | 28982 | - | S1_24 |
| CAZyme | NC_003919 | XAC_RS21435 | 29190 | 30374 | - | GH10 |
| CAZyme | NC_003919 | XAC_RS21440 | 30422 | 33091 | - | GH2 |
| pfam | NC_003919 | XAC_RS21445 | 33278 | 34696 | - | UxaC |
| CAZyme | NC_003919 | XAC_RS21465 | 36210 | 37202 | - | GH10 |
| TC | NC_003919 | XAC_RS21470 | 37207 | 38526 | - | 2.A.1.14.25 |
| pfam | NC_003919 | XAC_RS21475 | 38976 | 41909 | + | TonB_dep_Rec_b-barrel | Plug | OMP_b-brl_3 |
| TC | NC_003919 | XAC_RS21480 | 42008 | 43495 | + | 2.A.2.3.6 |
| CAZyme | NC_003919 | XAC_RS21485 | 43528 | 44562 | + | GH43_1 |
Gene ID: XAC_RS21315
Type: null
Location: 1 - 1338 (+)
Type: null
Location: 1 - 1338 (+)
Gene ID: XAC_RS21320
Type: TF
Location: 1552 - 2568 (-)
Type: TF
Location: 1552 - 2568 (-)
Gene ID: XAC_RS26510
Type: null
Location: 2477 - 2683 (+)
Type: null
Location: 2477 - 2683 (+)
Gene ID: XAC_RS21325
Type: CAZyme
Location: 2802 - 4997 (+)
Type: CAZyme
Location: 2802 - 4997 (+)
Gene ID: XAC_RS21330
Type: CAZyme
Location: 4994 - 6958 (+)
Type: CAZyme
Location: 4994 - 6958 (+)
Gene ID: XAC_RS21335
Type: pfam
Location: 6970 - 8229 (+)
Type: pfam
Location: 6970 - 8229 (+)
Gene ID: XAC_RS21340
Type: CAZyme
Location: 8253 - 9923 (+)
Type: CAZyme
Location: 8253 - 9923 (+)
Gene ID: XAC_RS21345
Type: CAZyme
Location: 9926 - 12631 (+)
Type: CAZyme
Location: 9926 - 12631 (+)
Gene ID: XAC_RS21350
Type: pfam
Location: 12781 - 14253 (+)
Type: pfam
Location: 12781 - 14253 (+)
Gene ID: XAC_RS21355
Type: STP
Location: 14335 - 14724 (-)
Type: STP
Location: 14335 - 14724 (-)
Gene ID: XAC_RS24580
Type: pfam
Location: 15062 - 15220 (+)
Type: pfam
Location: 15062 - 15220 (+)
Gene ID: XAC_RS21360
Type: null
Location: 15445 - 15966 (+)
Type: null
Location: 15445 - 15966 (+)
Gene ID: XAC_RS21370
Type: pfam
Location: 16518 - 17540 (+)
Type: pfam
Location: 16518 - 17540 (+)
Gene ID: XAC_RS21375
Type: STP
Location: 17674 - 18420 (-)
Type: STP
Location: 17674 - 18420 (-)
Gene ID: XAC_RS21380
Type: pfam
Location: 18632 - 20068 (-)
Type: pfam
Location: 18632 - 20068 (-)
Gene ID: XAC_RS21385
Type: pfam
Location: 20171 - 21313 (-)
Type: pfam
Location: 20171 - 21313 (-)
Gene ID: XAC_RS21390
Type: null
Location: 21392 - 22033 (-)
Type: null
Location: 21392 - 22033 (-)
Gene ID: XAC_RS21400
Type: pfam
Location: 23498 - 24178 (-)
Type: pfam
Location: 23498 - 24178 (-)
Gene ID: XAC_RS21405
Type: pfam
Location: 24165 - 25811 (-)
Type: pfam
Location: 24165 - 25811 (-)
Gene ID: XAC_RS21410
Type: pfam
Location: 25811 - 26728 (-)
Type: pfam
Location: 25811 - 26728 (-)
Gene ID: XAC_RS21415
Type: pfam
Location: 26811 - 27257 (-)
Type: pfam
Location: 26811 - 27257 (-)
Gene ID: XAC_RS25375
Type: null
Location: 27314 - 27652 (+)
Type: null
Location: 27314 - 27652 (+)
Gene ID: XAC_RS21430
Type: sulfatase
Location: 27945 - 28982 (-)
Type: sulfatase
Location: 27945 - 28982 (-)
Gene ID: XAC_RS21435
Type: CAZyme
Location: 29190 - 30374 (-)
Type: CAZyme
Location: 29190 - 30374 (-)
Gene ID: XAC_RS21440
Type: CAZyme
Location: 30422 - 33091 (-)
Type: CAZyme
Location: 30422 - 33091 (-)
Gene ID: XAC_RS21445
Type: pfam
Location: 33278 - 34696 (-)
Type: pfam
Location: 33278 - 34696 (-)
Gene ID: XAC_RS21465
Type: CAZyme
Location: 36210 - 37202 (-)
Type: CAZyme
Location: 36210 - 37202 (-)
Gene ID: XAC_RS21470
Type: TC
Location: 37207 - 38526 (-)
Type: TC
Location: 37207 - 38526 (-)
Gene ID: XAC_RS21475
Type: pfam
Location: 38976 - 41909 (+)
Type: pfam
Location: 38976 - 41909 (+)
Gene ID: XAC_RS21480
Type: TC
Location: 42008 - 43495 (+)
Type: TC
Location: 42008 - 43495 (+)
Gene ID: XAC_RS21485
Type: CAZyme
Location: 43528 - 44562 (+)
Type: CAZyme
Location: 43528 - 44562 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Species
Xanthomonas citri
Gene Composition
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