Cluster: PUL0699
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate: beta-mannan
- Genome ID: PUL0699
- CGC Family ID: CGCFAM_00226
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_015977 | RHOM_RS11115 | 1 | 1305 | - | GH3 |
| CAZyme | NC_015977 | RHOM_RS11120 | 1389 | 3704 | - | GH1 |
| CAZyme | NC_015977 | RHOM_RS11125 | 3818 | 4981 | - | CBM35inCE17 | CE17 |
| CAZyme | NC_015977 | RHOM_RS11130 | 5022 | 6077 | - | CE2 |
| CAZyme | NC_015977 | RHOM_RS11135 | 6222 | 7244 | - | GH130_2 |
| CAZyme | NC_015977 | RHOM_RS11140 | 7299 | 8474 | - | GH130_1 |
| pfam | NC_015977 | RHOM_RS11145 | 8487 | 9719 | - | GlcNAc_2-epim |
| TC | NC_015977 | RHOM_RS17790 | 9742 | 10596 | - | 3.A.1.1.18 |
| TC | NC_015977 | RHOM_RS17795 | 10597 | 11643 | - | 3.A.1.1.20 |
| STP | NC_015977 | RHOM_RS11160 | 11735 | 13186 | - | SBP_bac_1 |
| TF | NC_015977 | RHOM_RS16565 | 13486 | 14436 | + | HTH_AraC |
| TF | NC_015977 | RHOM_RS11170 | 14433 | 15464 | - | LacI |
| CAZyme | NC_015977 | RHOM_RS11175 | 15480 | 17684 | - | GH36 |
| pfam | NC_015977 | RHOM_RS11180 | 17700 | 19415 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
Gene ID: RHOM_RS11115
Type: CAZyme
Location: 1 - 1305 (-)
Type: CAZyme
Location: 1 - 1305 (-)
Gene ID: RHOM_RS11120
Type: CAZyme
Location: 1389 - 3704 (-)
Type: CAZyme
Location: 1389 - 3704 (-)
Gene ID: RHOM_RS11125
Type: CAZyme
Location: 3818 - 4981 (-)
Type: CAZyme
Location: 3818 - 4981 (-)
Gene ID: RHOM_RS11130
Type: CAZyme
Location: 5022 - 6077 (-)
Type: CAZyme
Location: 5022 - 6077 (-)
Gene ID: RHOM_RS11135
Type: CAZyme
Location: 6222 - 7244 (-)
Type: CAZyme
Location: 6222 - 7244 (-)
Gene ID: RHOM_RS11140
Type: CAZyme
Location: 7299 - 8474 (-)
Type: CAZyme
Location: 7299 - 8474 (-)
Gene ID: RHOM_RS11145
Type: pfam
Location: 8487 - 9719 (-)
Type: pfam
Location: 8487 - 9719 (-)
Gene ID: RHOM_RS17790
Type: TC
Location: 9742 - 10596 (-)
Type: TC
Location: 9742 - 10596 (-)
Gene ID: RHOM_RS17795
Type: TC
Location: 10597 - 11643 (-)
Type: TC
Location: 10597 - 11643 (-)
Gene ID: RHOM_RS11160
Type: STP
Location: 11735 - 13186 (-)
Type: STP
Location: 11735 - 13186 (-)
Gene ID: RHOM_RS16565
Type: TF
Location: 13486 - 14436 (+)
Type: TF
Location: 13486 - 14436 (+)
Gene ID: RHOM_RS11170
Type: TF
Location: 14433 - 15464 (-)
Type: TF
Location: 14433 - 15464 (-)
Gene ID: RHOM_RS11175
Type: CAZyme
Location: 15480 - 17684 (-)
Type: CAZyme
Location: 15480 - 17684 (-)
Gene ID: RHOM_RS11180
Type: pfam
Location: 17700 - 19415 (-)
Type: pfam
Location: 17700 - 19415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Composition
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