Cluster: PUL0693
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 2
- Substrate: alginate
- Genome ID: PUL0693
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | NZ_CP090616 | LZI70_RS20395 | 5 | 700 | + | Pirin | Pirin_C_2 |
| CAZyme | NZ_CP090616 | LZI70_RS20400 | 1023 | 3059 | - | PL17_1 |
| pfam | NZ_CP090616 | LZI70_RS20405 | 3056 | 4489 | - | UxaC |
| TC | NZ_CP090616 | LZI70_RS20410 | 4619 | 6385 | - | 2.A.21.3.11 |
| TC | NZ_CP090616 | LZI70_RS20415 | 6909 | 8675 | + | 2.A.21.3.11 |
| TC | NZ_CP090616 | LZI70_RS20420 | 8784 | 10778 | + | 4.D.1.1.7 |
| CAZyme | NZ_CP090616 | LZI70_RS20425 | 10981 | 12162 | + | PL38 |
| TC | NZ_CP090616 | LZI70_RS20430 | 12178 | 12852 | + | 1.B.35.1.4 |
| TC | NZ_CP090616 | LZI70_RS20435 | 12925 | 14496 | + | 1.B.52.2.1 |
| pfam | NZ_CP090616 | LZI70_RS20440 | 14525 | 15247 | - | RNase_T |
| STP | NZ_CP090616 | LZI70_RS20445 | 15249 | 17117 | - | CBS | cNMP_binding |
| TF | NZ_CP090616 | LZI70_RS20450 | 17203 | 17985 | - | HTH_5 |
| pfam | NZ_CP090616 | LZI70_RS20455 | 18245 | 19006 | + | adh_short | KR | adh_short_C2 |
| pfam | NZ_CP090616 | LZI70_RS20460 | 19059 | 19619 | + | Imp-YgjV |
| STP | NZ_CP090616 | LZI70_RS20465 | 19589 | 19909 | + | AraC_binding |
| pfam | NZ_CP090616 | LZI70_RS20470 | 19972 | 20607 | + | LacAB_rpiB | DUF3666 |
| pfam | NZ_CP090616 | LZI70_RS20475 | 20918 | 21541 | - | Aldolase |
Gene ID: LZI70_RS20395
Type: pfam
Location: 5 - 700 (+)
Type: pfam
Location: 5 - 700 (+)
Gene ID: LZI70_RS20400
Type: CAZyme
Location: 1023 - 3059 (-)
Type: CAZyme
Location: 1023 - 3059 (-)
Gene ID: LZI70_RS20405
Type: pfam
Location: 3056 - 4489 (-)
Type: pfam
Location: 3056 - 4489 (-)
Gene ID: LZI70_RS20410
Type: TC
Location: 4619 - 6385 (-)
Type: TC
Location: 4619 - 6385 (-)
Gene ID: LZI70_RS20415
Type: TC
Location: 6909 - 8675 (+)
Type: TC
Location: 6909 - 8675 (+)
Gene ID: LZI70_RS20420
Type: TC
Location: 8784 - 10778 (+)
Type: TC
Location: 8784 - 10778 (+)
Gene ID: LZI70_RS20425
Type: CAZyme
Location: 10981 - 12162 (+)
Type: CAZyme
Location: 10981 - 12162 (+)
Gene ID: LZI70_RS20430
Type: TC
Location: 12178 - 12852 (+)
Type: TC
Location: 12178 - 12852 (+)
Gene ID: LZI70_RS20435
Type: TC
Location: 12925 - 14496 (+)
Type: TC
Location: 12925 - 14496 (+)
Gene ID: LZI70_RS20440
Type: pfam
Location: 14525 - 15247 (-)
Type: pfam
Location: 14525 - 15247 (-)
Gene ID: LZI70_RS20445
Type: STP
Location: 15249 - 17117 (-)
Type: STP
Location: 15249 - 17117 (-)
Gene ID: LZI70_RS20450
Type: TF
Location: 17203 - 17985 (-)
Type: TF
Location: 17203 - 17985 (-)
Gene ID: LZI70_RS20455
Type: pfam
Location: 18245 - 19006 (+)
Type: pfam
Location: 18245 - 19006 (+)
Gene ID: LZI70_RS20460
Type: pfam
Location: 19059 - 19619 (+)
Type: pfam
Location: 19059 - 19619 (+)
Gene ID: LZI70_RS20465
Type: STP
Location: 19589 - 19909 (+)
Type: STP
Location: 19589 - 19909 (+)
Gene ID: LZI70_RS20470
Type: pfam
Location: 19972 - 20607 (+)
Type: pfam
Location: 19972 - 20607 (+)
Gene ID: LZI70_RS20475
Type: pfam
Location: 20918 - 21541 (-)
Type: pfam
Location: 20918 - 21541 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Species
Vibrio pelagius
Gene Composition
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