Cluster: PUL0692
🧬 Cluster Details
- Gene Count: 26
- CAZyme Count: 2
- Substrate: alginate
- Genome ID: PUL0692
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NZ_CP090615 | LZI70_RS17655 | 11 | 1186 | - | 2.A.1.81.1 |
| TF | NZ_CP090615 | LZI70_RS17660 | 1347 | 2243 | + | HTH_1 |
| TC | NZ_CP090615 | LZI70_RS17665 | 2439 | 4205 | - | 2.A.21.3.13 |
| TC | NZ_CP090615 | LZI70_RS17670 | 5205 | 5879 | + | 1.B.35.1.4 |
| TF | NZ_CP090615 | LZI70_RS17675 | 5999 | 6718 | - | GntR |
| TF | NZ_CP090615 | LZI70_RS17680 | 7383 | 8114 | + | GntR |
| pfam | NZ_CP090615 | LZI70_RS17685 | 8178 | 9563 | + | MatE | MatE |
| pfam | NZ_CP090615 | LZI70_RS17690 | 9608 | 10582 | - | DHH | DHHA1 |
| TC | NZ_CP090615 | LZI70_RS17695 | 10834 | 11598 | - | 3.A.1.14.7 |
| TC | NZ_CP090615 | LZI70_RS17700 | 11611 | 12561 | - | 3.A.1.14.18 |
| TC | NZ_CP090615 | LZI70_RS17705 | 12554 | 13507 | - | 3.A.1.14.21 |
| STP | NZ_CP090615 | LZI70_RS17710 | 13604 | 14539 | - | Peripla_BP_2 |
| NULL(UNKNOWN) | NZ_CP090615 | LZI70_RS17715 | 15212 | 15421 | + | NULL(UNKNOWN) |
| CAZyme | NZ_CP090615 | LZI70_RS17720 | 15676 | 17826 | - | PL17 | PL17_2 |
| CAZyme | NZ_CP090615 | LZI70_RS17725 | 17829 | 20012 | - | PL17 | PL17_2 |
| STP | NZ_CP090615 | LZI70_RS17730 | 20345 | 20680 | + | AraC_binding |
| STP | NZ_CP090615 | LZI70_RS17735 | 20715 | 21653 | + | PfkB |
| pfam | NZ_CP090615 | LZI70_RS17740 | 21784 | 22410 | + | Aldolase |
| TC | NZ_CP090615 | LZI70_RS17745 | 22884 | 24641 | + | 2.A.21.3.11 |
| NULL(UNKNOWN) | NZ_CP090615 | LZI70_RS17750 | 24802 | 25395 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | NZ_CP090615 | LZI70_RS17755 | 25688 | 26185 | - | NULL(UNKNOWN) |
| TC | NZ_CP090615 | LZI70_RS17760 | 26258 | 29377 | - | 2.A.6.1.4 |
| TC | NZ_CP090615 | LZI70_RS17765 | 29380 | 31092 | - | 2.A.6.1.8 |
| pfam | NZ_CP090615 | LZI70_RS17770 | 31102 | 32529 | - | OEP | OEP |
| NULL(UNKNOWN) | NZ_CP090615 | LZI70_RS17775 | 32662 | 33069 | - | NULL(UNKNOWN) |
| TC | NZ_CP090615 | LZI70_RS17780 | 33401 | 35336 | + | 1.B.52.2.1 |
Gene ID: LZI70_RS17655
Type: TC
Location: 11 - 1186 (-)
Type: TC
Location: 11 - 1186 (-)
Gene ID: LZI70_RS17660
Type: TF
Location: 1347 - 2243 (+)
Type: TF
Location: 1347 - 2243 (+)
Gene ID: LZI70_RS17665
Type: TC
Location: 2439 - 4205 (-)
Type: TC
Location: 2439 - 4205 (-)
Gene ID: LZI70_RS17670
Type: TC
Location: 5205 - 5879 (+)
Type: TC
Location: 5205 - 5879 (+)
Gene ID: LZI70_RS17675
Type: TF
Location: 5999 - 6718 (-)
Type: TF
Location: 5999 - 6718 (-)
Gene ID: LZI70_RS17680
Type: TF
Location: 7383 - 8114 (+)
Type: TF
Location: 7383 - 8114 (+)
Gene ID: LZI70_RS17685
Type: pfam
Location: 8178 - 9563 (+)
Type: pfam
Location: 8178 - 9563 (+)
Gene ID: LZI70_RS17690
Type: pfam
Location: 9608 - 10582 (-)
Type: pfam
Location: 9608 - 10582 (-)
Gene ID: LZI70_RS17695
Type: TC
Location: 10834 - 11598 (-)
Type: TC
Location: 10834 - 11598 (-)
Gene ID: LZI70_RS17700
Type: TC
Location: 11611 - 12561 (-)
Type: TC
Location: 11611 - 12561 (-)
Gene ID: LZI70_RS17705
Type: TC
Location: 12554 - 13507 (-)
Type: TC
Location: 12554 - 13507 (-)
Gene ID: LZI70_RS17710
Type: STP
Location: 13604 - 14539 (-)
Type: STP
Location: 13604 - 14539 (-)
Gene ID: LZI70_RS17715
Type: null
Location: 15212 - 15421 (+)
Type: null
Location: 15212 - 15421 (+)
Gene ID: LZI70_RS17720
Type: CAZyme
Location: 15676 - 17826 (-)
Type: CAZyme
Location: 15676 - 17826 (-)
Gene ID: LZI70_RS17725
Type: CAZyme
Location: 17829 - 20012 (-)
Type: CAZyme
Location: 17829 - 20012 (-)
Gene ID: LZI70_RS17730
Type: STP
Location: 20345 - 20680 (+)
Type: STP
Location: 20345 - 20680 (+)
Gene ID: LZI70_RS17735
Type: STP
Location: 20715 - 21653 (+)
Type: STP
Location: 20715 - 21653 (+)
Gene ID: LZI70_RS17740
Type: pfam
Location: 21784 - 22410 (+)
Type: pfam
Location: 21784 - 22410 (+)
Gene ID: LZI70_RS17745
Type: TC
Location: 22884 - 24641 (+)
Type: TC
Location: 22884 - 24641 (+)
Gene ID: LZI70_RS17750
Type: null
Location: 24802 - 25395 (-)
Type: null
Location: 24802 - 25395 (-)
Gene ID: LZI70_RS17755
Type: null
Location: 25688 - 26185 (-)
Type: null
Location: 25688 - 26185 (-)
Gene ID: LZI70_RS17760
Type: TC
Location: 26258 - 29377 (-)
Type: TC
Location: 26258 - 29377 (-)
Gene ID: LZI70_RS17765
Type: TC
Location: 29380 - 31092 (-)
Type: TC
Location: 29380 - 31092 (-)
Gene ID: LZI70_RS17770
Type: pfam
Location: 31102 - 32529 (-)
Type: pfam
Location: 31102 - 32529 (-)
Gene ID: LZI70_RS17775
Type: null
Location: 32662 - 33069 (-)
Type: null
Location: 32662 - 33069 (-)
Gene ID: LZI70_RS17780
Type: TC
Location: 33401 - 35336 (+)
Type: TC
Location: 33401 - 35336 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Species
Vibrio pelagius
Gene Composition
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