Cluster: PUL0689_Rep_490_C0
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate: galactan
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0689_Rep_490_C0 | Rep_490_c_2_1518 | 1889604 | 1891760 | - | GH36 |
| CAZyme | PUL0689_Rep_490_C0 | Rep_490_c_2_1519 | 1891842 | 1893386 | - | CBM91 | GH43_10 |
| NULL(UNKNOWN) | PUL0689_Rep_490_C0 | Rep_490_c_2_1520 | 1893416 | 1893604 | - | NULL(UNKNOWN) |
| CAZyme | PUL0689_Rep_490_C0 | Rep_490_c_2_1521 | 1893601 | 1895880 | - | GH3 |
| CAZyme | PUL0689_Rep_490_C0 | Rep_490_c_2_1522 | 1895887 | 1898850 | - | CBM32 | GH2 |
| pfam | PUL0689_Rep_490_C0 | Rep_490_c_2_1524 | 1899046 | 1900260 | - | DUF4998 | DUF5013 |
| pfam | PUL0689_Rep_490_C0 | Rep_490_c_2_1525 | 1900300 | 1901505 | - | DUF4959 | DUF5000 | DUF5126 |
| pfam | PUL0689_Rep_490_C0 | Rep_490_c_2_1526 | 1901535 | 1903475 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0689_Rep_490_C0 | Rep_490_c_2_1527 | 1903489 | 1906617 | - | 1.B.14.6.1 |
| TF | PUL0689_Rep_490_C0 | Rep_490_c_2_1528 | 1906854 | 1910867 | - | HTH_8 | HTH_AraC |
Gene ID: Rep_490_c_2_1518
Type: CAZyme
Location: 1889604 - 1891760 (-)
Type: CAZyme
Location: 1889604 - 1891760 (-)
Gene ID: Rep_490_c_2_1519
Type: CAZyme
Location: 1891842 - 1893386 (-)
Type: CAZyme
Location: 1891842 - 1893386 (-)
Gene ID: Rep_490_c_2_1520
Type: null
Location: 1893416 - 1893604 (-)
Type: null
Location: 1893416 - 1893604 (-)
Gene ID: Rep_490_c_2_1521
Type: CAZyme
Location: 1893601 - 1895880 (-)
Type: CAZyme
Location: 1893601 - 1895880 (-)
Gene ID: Rep_490_c_2_1522
Type: CAZyme
Location: 1895887 - 1898850 (-)
Type: CAZyme
Location: 1895887 - 1898850 (-)
Gene ID: Rep_490_c_2_1524
Type: pfam
Location: 1899046 - 1900260 (-)
Type: pfam
Location: 1899046 - 1900260 (-)
Gene ID: Rep_490_c_2_1525
Type: pfam
Location: 1900300 - 1901505 (-)
Type: pfam
Location: 1900300 - 1901505 (-)
Gene ID: Rep_490_c_2_1526
Type: pfam
Location: 1901535 - 1903475 (-)
Type: pfam
Location: 1901535 - 1903475 (-)
Gene ID: Rep_490_c_2_1527
Type: TC
Location: 1903489 - 1906617 (-)
Type: TC
Location: 1903489 - 1906617 (-)
Gene ID: Rep_490_c_2_1528
Type: TF
Location: 1906854 - 1910867 (-)
Type: TF
Location: 1906854 - 1910867 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
Loading chart...
← Back to Cluster List