Cluster: PUL0669
🧬 Cluster Details
- Gene Count: 26
- CAZyme Count: 15
- Substrate: xylan
- Genome ID: PUL0669
- CGC Family ID: CGCFAM_00273
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_GL622542 | HMPREF1016_RS10680 | 1 | 1710 | + | GH35 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10685 | 1754 | 3385 | + | CE20 | CE20 |
| TC | NZ_GL622542 | HMPREF1016_RS10690 | 3431 | 4927 | + | 2.A.2.3.4 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10695 | 5017 | 5988 | + | GH43_1 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10700 | 6122 | 8077 | + | GH67 |
| TF | NZ_GL622542 | HMPREF1016_RS10705 | 8358 | 12455 | + | HTH_AraC | HTH_AraC |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10710 | 12531 | 15113 | - | GH115 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10715 | 15205 | 17355 | - | GH95 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS20970 | 17345 | 18457 | - | CE6 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS19820 | 18482 | 20923 | - | CE15 | GH8 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10725 | 20987 | 22933 | - | GH97 |
| TF | NZ_GL622542 | HMPREF1016_RS10730 | 23177 | 26284 | + | HTH_AraC |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10735 | 26546 | 28999 | + | GH31_4 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10740 | 29063 | 31504 | - | CBM91 | GH43_10 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10745 | 31548 | 32696 | - | CE1 |
| TF | NZ_GL622542 | HMPREF1016_RS10750 | 33008 | 33646 | - | 0041905 |
| NULL(UNKNOWN) | NZ_GL622542 | HMPREF1016_RS10755 | 33661 | 34029 | - | NULL(UNKNOWN) |
| pfam | NZ_GL622542 | HMPREF1016_RS10760 | 34340 | 34867 | + | BT4734-like_N |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10765 | 34908 | 36896 | - | GH5_21 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10770 | 37001 | 39160 | - | GH10 |
| pfam | NZ_GL622542 | HMPREF1016_RS10775 | 39172 | 40218 | - | BT_3987-like_N | DUF5627 |
| pfam | NZ_GL622542 | HMPREF1016_RS10780 | 40248 | 42056 | - | SusD_RagB | SusD-like_3 |
| peptidase | NZ_GL622542 | HMPREF1016_RS10785 | 42073 | 44937 | - | I39.UPW |
| pfam | NZ_GL622542 | HMPREF1016_RS10790 | 44982 | 46925 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_GL622542 | HMPREF1016_RS10795 | 46937 | 50092 | - | 1.B.14.6.1 |
| CAZyme | NZ_GL622542 | HMPREF1016_RS10800 | 50364 | 52097 | - | CBM91 | GH43_12 |
Gene ID: HMPREF1016_RS10680
Type: CAZyme
Location: 1 - 1710 (+)
Type: CAZyme
Location: 1 - 1710 (+)
Gene ID: HMPREF1016_RS10685
Type: CAZyme
Location: 1754 - 3385 (+)
Type: CAZyme
Location: 1754 - 3385 (+)
Gene ID: HMPREF1016_RS10690
Type: TC
Location: 3431 - 4927 (+)
Type: TC
Location: 3431 - 4927 (+)
Gene ID: HMPREF1016_RS10695
Type: CAZyme
Location: 5017 - 5988 (+)
Type: CAZyme
Location: 5017 - 5988 (+)
Gene ID: HMPREF1016_RS10700
Type: CAZyme
Location: 6122 - 8077 (+)
Type: CAZyme
Location: 6122 - 8077 (+)
Gene ID: HMPREF1016_RS10705
Type: TF
Location: 8358 - 12455 (+)
Type: TF
Location: 8358 - 12455 (+)
Gene ID: HMPREF1016_RS10710
Type: CAZyme
Location: 12531 - 15113 (-)
Type: CAZyme
Location: 12531 - 15113 (-)
Gene ID: HMPREF1016_RS10715
Type: CAZyme
Location: 15205 - 17355 (-)
Type: CAZyme
Location: 15205 - 17355 (-)
Gene ID: HMPREF1016_RS20970
Type: CAZyme
Location: 17345 - 18457 (-)
Type: CAZyme
Location: 17345 - 18457 (-)
Gene ID: HMPREF1016_RS19820
Type: CAZyme
Location: 18482 - 20923 (-)
Type: CAZyme
Location: 18482 - 20923 (-)
Gene ID: HMPREF1016_RS10725
Type: CAZyme
Location: 20987 - 22933 (-)
Type: CAZyme
Location: 20987 - 22933 (-)
Gene ID: HMPREF1016_RS10730
Type: TF
Location: 23177 - 26284 (+)
Type: TF
Location: 23177 - 26284 (+)
Gene ID: HMPREF1016_RS10735
Type: CAZyme
Location: 26546 - 28999 (+)
Type: CAZyme
Location: 26546 - 28999 (+)
Gene ID: HMPREF1016_RS10740
Type: CAZyme
Location: 29063 - 31504 (-)
Type: CAZyme
Location: 29063 - 31504 (-)
Gene ID: HMPREF1016_RS10745
Type: CAZyme
Location: 31548 - 32696 (-)
Type: CAZyme
Location: 31548 - 32696 (-)
Gene ID: HMPREF1016_RS10750
Type: TF
Location: 33008 - 33646 (-)
Type: TF
Location: 33008 - 33646 (-)
Gene ID: HMPREF1016_RS10755
Type: null
Location: 33661 - 34029 (-)
Type: null
Location: 33661 - 34029 (-)
Gene ID: HMPREF1016_RS10760
Type: pfam
Location: 34340 - 34867 (+)
Type: pfam
Location: 34340 - 34867 (+)
Gene ID: HMPREF1016_RS10765
Type: CAZyme
Location: 34908 - 36896 (-)
Type: CAZyme
Location: 34908 - 36896 (-)
Gene ID: HMPREF1016_RS10770
Type: CAZyme
Location: 37001 - 39160 (-)
Type: CAZyme
Location: 37001 - 39160 (-)
Gene ID: HMPREF1016_RS10775
Type: pfam
Location: 39172 - 40218 (-)
Type: pfam
Location: 39172 - 40218 (-)
Gene ID: HMPREF1016_RS10780
Type: pfam
Location: 40248 - 42056 (-)
Type: pfam
Location: 40248 - 42056 (-)
Gene ID: HMPREF1016_RS10785
Type: peptidase
Location: 42073 - 44937 (-)
Type: peptidase
Location: 42073 - 44937 (-)
Gene ID: HMPREF1016_RS10790
Type: pfam
Location: 44982 - 46925 (-)
Type: pfam
Location: 44982 - 46925 (-)
Gene ID: HMPREF1016_RS10795
Type: TC
Location: 46937 - 50092 (-)
Type: TC
Location: 46937 - 50092 (-)
Gene ID: HMPREF1016_RS10800
Type: CAZyme
Location: 50364 - 52097 (-)
Type: CAZyme
Location: 50364 - 52097 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides eggerthii
Gene Composition
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