Cluster: PUL0665_Rep_490_C0
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0665_Rep_490_C0 | Rep_490_c_2_1717 | 2182641 | 2184227 | - | GH30_4 |
| pfam | PUL0665_Rep_490_C0 | Rep_490_c_2_1718 | 2184476 | 2185363 | - | BT_3987-like_N | BT_3044-like_C |
| pfam | PUL0665_Rep_490_C0 | Rep_490_c_2_1719 | 2185412 | 2187394 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0665_Rep_490_C0 | Rep_490_c_2_1720 | 2187434 | 2190529 | - | 1.B.14.6.1 |
| pfam | PUL0665_Rep_490_C0 | Rep_490_c_2_1721 | 2190552 | 2191853 | - | TIG |
| NULL(UNKNOWN) | PUL0665_Rep_490_C0 | Rep_490_c_2_1722 | 2192208 | 2194895 | - | NULL(UNKNOWN) |
| TF | PUL0665_Rep_490_C0 | Rep_490_c_2_1723 | 2195080 | 2199210 | + | HTH_AraC | Mga |
| CAZyme | PUL0665_Rep_490_C0 | Rep_490_c_2_1724 | 2199179 | 2200144 | - | GH18 |
Gene ID: Rep_490_c_2_1717
Type: CAZyme
Location: 2182641 - 2184227 (-)
Type: CAZyme
Location: 2182641 - 2184227 (-)
Gene ID: Rep_490_c_2_1718
Type: pfam
Location: 2184476 - 2185363 (-)
Type: pfam
Location: 2184476 - 2185363 (-)
Gene ID: Rep_490_c_2_1719
Type: pfam
Location: 2185412 - 2187394 (-)
Type: pfam
Location: 2185412 - 2187394 (-)
Gene ID: Rep_490_c_2_1720
Type: TC
Location: 2187434 - 2190529 (-)
Type: TC
Location: 2187434 - 2190529 (-)
Gene ID: Rep_490_c_2_1721
Type: pfam
Location: 2190552 - 2191853 (-)
Type: pfam
Location: 2190552 - 2191853 (-)
Gene ID: Rep_490_c_2_1722
Type: null
Location: 2192208 - 2194895 (-)
Type: null
Location: 2192208 - 2194895 (-)
Gene ID: Rep_490_c_2_1723
Type: TF
Location: 2195080 - 2199210 (+)
Type: TF
Location: 2195080 - 2199210 (+)
Gene ID: Rep_490_c_2_1724
Type: CAZyme
Location: 2199179 - 2200144 (-)
Type: CAZyme
Location: 2199179 - 2200144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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