Cluster: PUL0664
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate: arabinogalactan
- Genome ID: PUL0664
- CGC Family ID: CGCFAM_04187
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | NZ_DS990119 | BACPLE_RS02415 | 1 | 4227 | - | HTH_AraC |
| CAZyme | NZ_DS990119 | BACPLE_RS02420 | 4547 | 6031 | - | GH49 |
| CAZyme | NZ_DS990119 | BACPLE_RS02425 | 6215 | 8047 | + | GH2 |
| sulfatase | NZ_DS990119 | BACPLE_RS02430 | 8065 | 9495 | + | S1_8 |
| CAZyme | NZ_DS990119 | BACPLE_RS02435 | 9589 | 11025 | + | GH27 |
| CAZyme | NZ_DS990119 | BACPLE_RS02440 | 11043 | 13022 | + | GH43 |
| sulfatase | NZ_DS990119 | BACPLE_RS02445 | 13133 | 14512 | + | S1_14 |
| CAZyme | NZ_DS990119 | BACPLE_RS02450 | 14612 | 16669 | - | GH36 |
| CAZyme | NZ_DS990119 | BACPLE_RS02455 | 16687 | 18060 | - | GH49 |
| CAZyme | NZ_DS990119 | BACPLE_RS02460 | 18085 | 19089 | - | GH43 |
| NULL(UNKNOWN) | NZ_DS990119 | BACPLE_RS02465 | 19138 | 19932 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | NZ_DS990119 | BACPLE_RS19600 | 19938 | 20237 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | NZ_DS990119 | BACPLE_RS02470 | 20274 | 21080 | - | NULL(UNKNOWN) |
| CAZyme | NZ_DS990119 | BACPLE_RS02475 | 21223 | 24147 | - | GH2 |
| pfam | NZ_DS990119 | BACPLE_RS02480 | 24264 | 25916 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | NZ_DS990119 | BACPLE_RS02485 | 25935 | 28955 | - | 1.B.14.6.1 |
Gene ID: BACPLE_RS02415
Type: TF
Location: 1 - 4227 (-)
Type: TF
Location: 1 - 4227 (-)
Gene ID: BACPLE_RS02420
Type: CAZyme
Location: 4547 - 6031 (-)
Type: CAZyme
Location: 4547 - 6031 (-)
Gene ID: BACPLE_RS02425
Type: CAZyme
Location: 6215 - 8047 (+)
Type: CAZyme
Location: 6215 - 8047 (+)
Gene ID: BACPLE_RS02430
Type: sulfatase
Location: 8065 - 9495 (+)
Type: sulfatase
Location: 8065 - 9495 (+)
Gene ID: BACPLE_RS02435
Type: CAZyme
Location: 9589 - 11025 (+)
Type: CAZyme
Location: 9589 - 11025 (+)
Gene ID: BACPLE_RS02440
Type: CAZyme
Location: 11043 - 13022 (+)
Type: CAZyme
Location: 11043 - 13022 (+)
Gene ID: BACPLE_RS02445
Type: sulfatase
Location: 13133 - 14512 (+)
Type: sulfatase
Location: 13133 - 14512 (+)
Gene ID: BACPLE_RS02450
Type: CAZyme
Location: 14612 - 16669 (-)
Type: CAZyme
Location: 14612 - 16669 (-)
Gene ID: BACPLE_RS02455
Type: CAZyme
Location: 16687 - 18060 (-)
Type: CAZyme
Location: 16687 - 18060 (-)
Gene ID: BACPLE_RS02460
Type: CAZyme
Location: 18085 - 19089 (-)
Type: CAZyme
Location: 18085 - 19089 (-)
Gene ID: BACPLE_RS02465
Type: null
Location: 19138 - 19932 (-)
Type: null
Location: 19138 - 19932 (-)
Gene ID: BACPLE_RS19600
Type: null
Location: 19938 - 20237 (-)
Type: null
Location: 19938 - 20237 (-)
Gene ID: BACPLE_RS02470
Type: null
Location: 20274 - 21080 (-)
Type: null
Location: 20274 - 21080 (-)
Gene ID: BACPLE_RS02475
Type: CAZyme
Location: 21223 - 24147 (-)
Type: CAZyme
Location: 21223 - 24147 (-)
Gene ID: BACPLE_RS02480
Type: pfam
Location: 24264 - 25916 (-)
Type: pfam
Location: 24264 - 25916 (-)
Gene ID: BACPLE_RS02485
Type: TC
Location: 25935 - 28955 (-)
Type: TC
Location: 25935 - 28955 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius
Gene Composition
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