Cluster: PUL0663_Rep_532_C0
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: arabinogalactan
- Genome ID: Rep_532
- CGC Family ID: CGCFAM_00582
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0663_Rep_532_C0 | Rep_532_c_16_6 | 5008 | 6285 | + | PL42 |
| CAZyme | PUL0663_Rep_532_C0 | Rep_532_c_16_7 | 6301 | 8610 | + | GH105 | GH154 |
| CAZyme | PUL0663_Rep_532_C0 | Rep_532_c_16_8 | 8767 | 9777 | + | GH43_17 |
| CAZyme | PUL0663_Rep_532_C0 | Rep_532_c_16_9 | 9798 | 10937 | + | GH43_24 |
| TF | PUL0663_Rep_532_C0 | Rep_532_c_16_12 | 13323 | 17357 | - | HTH_AraC | Mga |
| TC | PUL0663_Rep_532_C0 | Rep_532_c_16_13 | 17931 | 21233 | + | 1.B.14.6.1 |
| pfam | PUL0663_Rep_532_C0 | Rep_532_c_16_14 | 21251 | 23278 | + | SusD_RagB | SusD-like_3 |
Gene ID: Rep_532_c_16_6
Type: CAZyme
Location: 5008 - 6285 (+)
Type: CAZyme
Location: 5008 - 6285 (+)
Gene ID: Rep_532_c_16_7
Type: CAZyme
Location: 6301 - 8610 (+)
Type: CAZyme
Location: 6301 - 8610 (+)
Gene ID: Rep_532_c_16_8
Type: CAZyme
Location: 8767 - 9777 (+)
Type: CAZyme
Location: 8767 - 9777 (+)
Gene ID: Rep_532_c_16_9
Type: CAZyme
Location: 9798 - 10937 (+)
Type: CAZyme
Location: 9798 - 10937 (+)
Gene ID: Rep_532_c_16_12
Type: TF
Location: 13323 - 17357 (-)
Type: TF
Location: 13323 - 17357 (-)
Gene ID: Rep_532_c_16_13
Type: TC
Location: 17931 - 21233 (+)
Type: TC
Location: 17931 - 21233 (+)
Gene ID: Rep_532_c_16_14
Type: pfam
Location: 21251 - 23278 (+)
Type: pfam
Location: 21251 - 23278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551445
Gene Composition
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