Cluster: PUL0663
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: arabinogalactan
- Genome ID: PUL0663
- CGC Family ID: CGCFAM_00582
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | NZ_DS990123 | BACPLE_RS05590 | 1 | 2028 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_DS990123 | BACPLE_RS05595 | 2045 | 5347 | - | 1.B.14.6.1 |
| TF | NZ_DS990123 | BACPLE_RS05600 | 5669 | 9697 | + | HTH_AraC | Mga |
| CAZyme | NZ_DS990123 | BACPLE_RS05605 | 9768 | 10919 | - | GH43_24 |
| CAZyme | NZ_DS990123 | BACPLE_RS05610 | 10960 | 11952 | - | GH43_17 |
| CAZyme | NZ_DS990123 | BACPLE_RS19680 | 12082 | 13278 | - | GH154 |
| CAZyme | NZ_DS990123 | BACPLE_RS05620 | 14407 | 15684 | - | PL42 |
Gene ID: BACPLE_RS05590
Type: pfam
Location: 1 - 2028 (-)
Type: pfam
Location: 1 - 2028 (-)
Gene ID: BACPLE_RS05595
Type: TC
Location: 2045 - 5347 (-)
Type: TC
Location: 2045 - 5347 (-)
Gene ID: BACPLE_RS05600
Type: TF
Location: 5669 - 9697 (+)
Type: TF
Location: 5669 - 9697 (+)
Gene ID: BACPLE_RS05605
Type: CAZyme
Location: 9768 - 10919 (-)
Type: CAZyme
Location: 9768 - 10919 (-)
Gene ID: BACPLE_RS05610
Type: CAZyme
Location: 10960 - 11952 (-)
Type: CAZyme
Location: 10960 - 11952 (-)
Gene ID: BACPLE_RS19680
Type: CAZyme
Location: 12082 - 13278 (-)
Type: CAZyme
Location: 12082 - 13278 (-)
Gene ID: BACPLE_RS05620
Type: CAZyme
Location: 14407 - 15684 (-)
Type: CAZyme
Location: 14407 - 15684 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius
Gene Composition
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