dbCAN HGM

Cluster: PUL0651

Cluster Details
Gene Composition
Taxonomic Lineage
Gene Composition

🧬 Cluster Details

Gene Count: 63
CAZyme Count: 15
Substrate: galactan
Genome ID: PUL0651
Continent: NA
Source Study: dbCAN-PUL Database →

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	NZ_KB898707	D568_RS0106305	1	1764	+	CBM6 \| CBM6 \| GH16_16
TC	NZ_KB898707	D568_RS0106310	1857	4049	-	3.D.1.9.2
CAZyme	NZ_KB898707	D568_RS0106315	4219	6537	+	GH50
sulfatase	NZ_KB898707	D568_RS0106320	6620	8998	-	S1_14
sulfatase	NZ_KB898707	D568_RS0106325	9000	9698	-	S1_14
pfam	NZ_KB898707	D568_RS21010	9719	10375	-	Exop_C
pfam	NZ_KB898707	D568_RS0106335	10394	13834	-	HEAT_2 \| HEAT_2 \| DUF7133
TC	NZ_KB898707	D568_RS0106340	14181	17864	+	1.B.14.12.2
NULL(UNKNOWN)	NZ_KB898707	D568_RS0106345	17937	19925	+	NULL(UNKNOWN)
pfam	NZ_KB898707	D568_RS0106350	20053	21585	+	Trp_halogenase
sulfatase	NZ_KB898707	D568_RS0106355	21618	23003	+	S1_19
CAZyme	NZ_KB898707	D568_RS21015	23267	24706	+	CBM6
CAZyme	NZ_KB898707	D568_RS0106365	24896	26221	+	CBM13 \| GH16_16
TC	NZ_KB898707	D568_RS0106370	26411	27394	-	2.A.98.1.3
TF	NZ_KB898707	D568_RS0106375	27481	28374	+	HTH_1
CAZyme	NZ_KB898707	D568_RS0106380	28371	30659	-	GH50
STP	NZ_KB898707	D568_RS0106385	30702	32270	-	FecR
STP	NZ_KB898707	D568_RS21020	32245	32814	-	Sigma70_r2 \| Sigma70_r4
STP	NZ_KB898707	D568_RS0106395	32814	35123	-	Pyr_redox_2
CAZyme	NZ_KB898707	D568_RS0106400	35120	36352	-	GH117
TC	NZ_KB898707	D568_RS0106405	36352	38031	-	2.A.21.3.11
CAZyme	NZ_KB898707	D568_RS0106410	38094	39302	-	GH16_3
sulfatase	NZ_KB898707	D568_RS0106415	39569	41056	-	S1_19
NULL(UNKNOWN)	NZ_KB898707	D568_RS0106420	41231	41602	-	NULL(UNKNOWN)
CAZyme	NZ_KB898707	D568_RS0106425	41662	44028	-	GH2
pfam	NZ_KB898707	D568_RS0106430	44040	45491	-	Aldedh
sulfatase	NZ_KB898707	D568_RS0106435	45522	46292	-	S1_8
pfam	NZ_KB898707	D568_RS0106440	46303	47439	-	CoA_transf_3
pfam	NZ_KB898707	D568_RS0106445	47436	48578	-	CoA_transf_3
STP	NZ_KB898707	D568_RS0106450	48575	49735	-	SBP_bac_1
TF	NZ_KB898707	D568_RS0106455	49915	50694	+	0040266
pfam	NZ_KB898707	D568_RS0106460	50742	51896	+	DUF6786
pfam	NZ_KB898707	D568_RS0106465	51893	52579	+	adh_short \| Epimerase \| adh_short_C2
CAZyme	NZ_KB898707	D568_RS0106470	52778	54985	+	GH50
STP	NZ_KB898707	D568_RS21025	55186	56934	-	HATPase_c \| SBP_bac_3
TF	NZ_KB898707	D568_RS0106480	56882	57526	-	GerE
sulfatase	NZ_KB898707	D568_RS19500	58028	59617	+	S1_34
sulfatase	NZ_KB898707	D568_RS0106490	59795	61444	+	S1_51
pfam	NZ_KB898707	D568_RS0106495	61522	63021	-	Trp_halogenase
pfam	NZ_KB898707	D568_RS0106500	63148	65988	-	TonB_dep_Rec_b-barrel \| Plug \| OMP_b-brl_3
sulfatase	NZ_KB898707	D568_RS0106505	66331	67740	-	S1_19
CAZyme	NZ_KB898707	D568_RS0106510	67820	69802	-	GH127
TC	NZ_KB898707	D568_RS0106515	69823	71376	-	2.A.1.1.55
TF	NZ_KB898707	D568_RS0106520	71512	72252	-	GntR
pfam	NZ_KB898707	D568_RS0106525	72392	74644	-	MoCoBD_1 \| MoCoBD_2 \| MoCoBD_2
pfam	NZ_KB898707	D568_RS0106530	74656	75120	-	Fer2 \| Fer2_2 \| Fer2_3
NULL(UNKNOWN)	NZ_KB898707	D568_RS0106535	75117	75350	-	NULL(UNKNOWN)
pfam	NZ_KB898707	D568_RS0106540	75774	76373	-	NTP_transf_3
pfam	NZ_KB898707	D568_RS0106545	76363	77391	-	XdhC_CoxI \| XdhC_C
CAZyme	NZ_KB898707	D568_RS0106550	77367	79820	-	GH167
TF	NZ_KB898707	D568_RS0106555	79950	80807	-	HTH_AraC \| HTH_AraC
pfam	NZ_KB898707	D568_RS0106560	80947	82062	+	ADH_zinc_N \| AlaDh_PNT_C \| TrkA_N \| ADH_N
CAZyme	NZ_KB898707	D568_RS0106565	82073	82879	+	CE1
TF	NZ_KB898707	D568_RS0106570	83107	83712	+	GntR
CAZyme	NZ_KB898707	D568_RS0106575	83829	87884	-	CBM6 \| CBM6 \| GH86 \| GH86
sulfatase	NZ_KB898707	D568_RS0106580	88264	90603	-	S1_16
CAZyme	NZ_KB898707	D568_RS0106585	90604	92952	-	GH50
pfam	NZ_KB898707	D568_RS0106590	93052	94494	-	Aldedh
pfam	NZ_KB898707	D568_RS0106595	94500	95264	-	adh_short \| Epimerase \| KR \| adh_short_C2
pfam	NZ_KB898707	D568_RS0106600	95264	96286	-	ADH_zinc_N \| ADH_N \| ADH_zinc_N_2 \| Glu_dehyd_C
pfam	NZ_KB898707	D568_RS0106605	96295	97443	-	MR_MLE_N \| MR_MLE_C
TC	NZ_KB898707	D568_RS0106610	97486	99078	-	2.A.1.1.106
CAZyme	NZ_KB898707	D568_RS0106625	99583	101590	+	GH86

Gene ID: D568_RS0106305
Type: CAZyme
Location: 1 - 1764 (+)

Gene ID: D568_RS0106310
Type: TC
Location: 1857 - 4049 (-)

Gene ID: D568_RS0106315
Type: CAZyme
Location: 4219 - 6537 (+)

Gene ID: D568_RS0106320
Type: sulfatase
Location: 6620 - 8998 (-)

Gene ID: D568_RS0106325
Type: sulfatase
Location: 9000 - 9698 (-)

Gene ID: D568_RS21010
Type: pfam
Location: 9719 - 10375 (-)

Gene ID: D568_RS0106335
Type: pfam
Location: 10394 - 13834 (-)

Gene ID: D568_RS0106340
Type: TC
Location: 14181 - 17864 (+)

Gene ID: D568_RS0106345
Type: null
Location: 17937 - 19925 (+)

Gene ID: D568_RS0106350
Type: pfam
Location: 20053 - 21585 (+)

Gene ID: D568_RS0106355
Type: sulfatase
Location: 21618 - 23003 (+)

Gene ID: D568_RS21015
Type: CAZyme
Location: 23267 - 24706 (+)

Gene ID: D568_RS0106365
Type: CAZyme
Location: 24896 - 26221 (+)

Gene ID: D568_RS0106370
Type: TC
Location: 26411 - 27394 (-)

Gene ID: D568_RS0106375
Type: TF
Location: 27481 - 28374 (+)

Gene ID: D568_RS0106380
Type: CAZyme
Location: 28371 - 30659 (-)

Gene ID: D568_RS0106385
Type: STP
Location: 30702 - 32270 (-)

Gene ID: D568_RS21020
Type: STP
Location: 32245 - 32814 (-)

Gene ID: D568_RS0106395
Type: STP
Location: 32814 - 35123 (-)

Gene ID: D568_RS0106400
Type: CAZyme
Location: 35120 - 36352 (-)

Gene ID: D568_RS0106405
Type: TC
Location: 36352 - 38031 (-)

Gene ID: D568_RS0106410
Type: CAZyme
Location: 38094 - 39302 (-)

Gene ID: D568_RS0106415
Type: sulfatase
Location: 39569 - 41056 (-)

Gene ID: D568_RS0106420
Type: null
Location: 41231 - 41602 (-)

Gene ID: D568_RS0106425
Type: CAZyme
Location: 41662 - 44028 (-)

Gene ID: D568_RS0106430
Type: pfam
Location: 44040 - 45491 (-)

Gene ID: D568_RS0106435
Type: sulfatase
Location: 45522 - 46292 (-)

Gene ID: D568_RS0106440
Type: pfam
Location: 46303 - 47439 (-)

Gene ID: D568_RS0106445
Type: pfam
Location: 47436 - 48578 (-)

Gene ID: D568_RS0106450
Type: STP
Location: 48575 - 49735 (-)

Gene ID: D568_RS0106455
Type: TF
Location: 49915 - 50694 (+)

Gene ID: D568_RS0106460
Type: pfam
Location: 50742 - 51896 (+)

Gene ID: D568_RS0106465
Type: pfam
Location: 51893 - 52579 (+)

Gene ID: D568_RS0106470
Type: CAZyme
Location: 52778 - 54985 (+)

Gene ID: D568_RS21025
Type: STP
Location: 55186 - 56934 (-)

Gene ID: D568_RS0106480
Type: TF
Location: 56882 - 57526 (-)

Gene ID: D568_RS19500
Type: sulfatase
Location: 58028 - 59617 (+)

Gene ID: D568_RS0106490
Type: sulfatase
Location: 59795 - 61444 (+)

Gene ID: D568_RS0106495
Type: pfam
Location: 61522 - 63021 (-)

Gene ID: D568_RS0106500
Type: pfam
Location: 63148 - 65988 (-)

Gene ID: D568_RS0106505
Type: sulfatase
Location: 66331 - 67740 (-)

Gene ID: D568_RS0106510
Type: CAZyme
Location: 67820 - 69802 (-)

Gene ID: D568_RS0106515
Type: TC
Location: 69823 - 71376 (-)

Gene ID: D568_RS0106520
Type: TF
Location: 71512 - 72252 (-)

Gene ID: D568_RS0106525
Type: pfam
Location: 72392 - 74644 (-)

Gene ID: D568_RS0106530
Type: pfam
Location: 74656 - 75120 (-)

Gene ID: D568_RS0106535
Type: null
Location: 75117 - 75350 (-)

Gene ID: D568_RS0106540
Type: pfam
Location: 75774 - 76373 (-)

Gene ID: D568_RS0106545
Type: pfam
Location: 76363 - 77391 (-)

Gene ID: D568_RS0106550
Type: CAZyme
Location: 77367 - 79820 (-)

Gene ID: D568_RS0106555
Type: TF
Location: 79950 - 80807 (-)

Gene ID: D568_RS0106560
Type: pfam
Location: 80947 - 82062 (+)

Gene ID: D568_RS0106565
Type: CAZyme
Location: 82073 - 82879 (+)

Gene ID: D568_RS0106570
Type: TF
Location: 83107 - 83712 (+)

Gene ID: D568_RS0106575
Type: CAZyme
Location: 83829 - 87884 (-)

Gene ID: D568_RS0106580
Type: sulfatase
Location: 88264 - 90603 (-)

Gene ID: D568_RS0106585
Type: CAZyme
Location: 90604 - 92952 (-)

Gene ID: D568_RS0106590
Type: pfam
Location: 93052 - 94494 (-)

Gene ID: D568_RS0106595
Type: pfam
Location: 94500 - 95264 (-)

Gene ID: D568_RS0106600
Type: pfam
Location: 95264 - 96286 (-)

Gene ID: D568_RS0106605
Type: pfam
Location: 96295 - 97443 (-)

Gene ID: D568_RS0106610
Type: TC
Location: 97486 - 99078 (-)

Gene ID: D568_RS0106625
Type: CAZyme
Location: 99583 - 101590 (+)

Taxonomic Lineage

Domain

Bacteria

→

Phylum

Pseudomonadota

→

Class

Gammaproteobacteria

→

Order

Cellvibrionales

→

Family

Cellvibrionaceae

→

Genus

Gilvimarinus

→

Species

Gilvimarinus chinensis

Gene Composition

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