Cluster: PUL0648
🧬 Cluster Details
- Gene Count: 37
- CAZyme Count: 21
- Substrate: xylan
- Genome ID: PUL0648
- CGC Family ID: CGCFAM_06414
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_GL892007 | HMPREF9456_RS11100 | 1 | 2208 | - | GH10 |
| pfam | NZ_GL892007 | HMPREF9456_RS11105 | 2239 | 3279 | - | BT_3987-like_N | DUF5627 |
| pfam | NZ_GL892007 | HMPREF9456_RS11110 | 3315 | 5120 | - | SusD_RagB | SusD-like_3 |
| peptidase | NZ_GL892007 | HMPREF9456_RS11115 | 5135 | 7972 | - | I39.UPW |
| pfam | NZ_GL892007 | HMPREF9456_RS11120 | 8016 | 9959 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_GL892007 | HMPREF9456_RS11125 | 9971 | 13114 | - | 1.B.14.6.1 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11130 | 13669 | 15393 | - | CBM91 | GH43_12 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11135 | 15677 | 16648 | - | GH43_1 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11140 | 16656 | 17786 | - | GH10 |
| TF | NZ_GL892007 | HMPREF9456_RS11145 | 18578 | 22546 | + | HTH_AraC | HTH_AraC |
| pfam | NZ_GL892007 | HMPREF9456_RS11150 | 22794 | 24821 | + | Transketolase_N | Transket_pyr | Transketolase_C_1 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11155 | 24933 | 27296 | + | GH146 |
| STP | NZ_GL892007 | HMPREF9456_RS11160 | 27393 | 28094 | - | NUDIX |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11165 | 28397 | 29548 | - | CE1 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11170 | 29569 | 30852 | - | GH8 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11175 | 30866 | 31714 | - | CE6 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11180 | 31773 | 33128 | - | CBM6 | GH43_29 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11185 | 33149 | 34483 | - | CBM6 | GH43_29 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11190 | 34492 | 36432 | - | GH97 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11195 | 36465 | 38912 | - | GH31_4 |
| TF | NZ_GL892007 | HMPREF9456_RS11200 | 39048 | 42923 | - | HTH_AraC | HTH_AraC |
| STP | NZ_GL892007 | HMPREF9456_RS11205 | 43308 | 43895 | + | NTP_transf_2 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11210 | 44041 | 46473 | - | GH51_2 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11215 | 46513 | 47469 | - | GH43_29 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11220 | 47595 | 49565 | - | CE1 | CE1 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11225 | 49668 | 51215 | - | CBM91 | GH43_10 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11230 | 52026 | 54545 | + | GH115 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11235 | 54557 | 56488 | + | CE20 | CE20 |
| TC | NZ_GL892007 | HMPREF9456_RS11240 | 56501 | 57913 | + | 2.A.2.3.2 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11245 | 57939 | 59090 | + | GH10 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11250 | 59112 | 60086 | + | GH43_1 |
| CAZyme | NZ_GL892007 | HMPREF9456_RS11255 | 60190 | 62220 | + | GH67 |
| pfam | NZ_GL892007 | HMPREF9456_RS11260 | 62228 | 63400 | + | UxuA |
| pfam | NZ_GL892007 | HMPREF9456_RS11265 | 63397 | 64236 | + | adh_short | Epimerase | KR | adh_short_C2 |
| TF | NZ_GL892007 | HMPREF9456_RS11270 | 64559 | 68566 | - | HTH_AraC | HTH_AraC |
| TC | NZ_GL892007 | HMPREF9456_RS11275 | 69349 | 72540 | + | 1.B.14.6.1 |
| TC | NZ_GL892007 | HMPREF9456_RS11280 | 72560 | 74635 | + | 8.A.46.1.6 |
Gene ID: HMPREF9456_RS11100
Type: CAZyme
Location: 1 - 2208 (-)
Type: CAZyme
Location: 1 - 2208 (-)
Gene ID: HMPREF9456_RS11105
Type: pfam
Location: 2239 - 3279 (-)
Type: pfam
Location: 2239 - 3279 (-)
Gene ID: HMPREF9456_RS11110
Type: pfam
Location: 3315 - 5120 (-)
Type: pfam
Location: 3315 - 5120 (-)
Gene ID: HMPREF9456_RS11115
Type: peptidase
Location: 5135 - 7972 (-)
Type: peptidase
Location: 5135 - 7972 (-)
Gene ID: HMPREF9456_RS11120
Type: pfam
Location: 8016 - 9959 (-)
Type: pfam
Location: 8016 - 9959 (-)
Gene ID: HMPREF9456_RS11125
Type: TC
Location: 9971 - 13114 (-)
Type: TC
Location: 9971 - 13114 (-)
Gene ID: HMPREF9456_RS11130
Type: CAZyme
Location: 13669 - 15393 (-)
Type: CAZyme
Location: 13669 - 15393 (-)
Gene ID: HMPREF9456_RS11135
Type: CAZyme
Location: 15677 - 16648 (-)
Type: CAZyme
Location: 15677 - 16648 (-)
Gene ID: HMPREF9456_RS11140
Type: CAZyme
Location: 16656 - 17786 (-)
Type: CAZyme
Location: 16656 - 17786 (-)
Gene ID: HMPREF9456_RS11145
Type: TF
Location: 18578 - 22546 (+)
Type: TF
Location: 18578 - 22546 (+)
Gene ID: HMPREF9456_RS11150
Type: pfam
Location: 22794 - 24821 (+)
Type: pfam
Location: 22794 - 24821 (+)
Gene ID: HMPREF9456_RS11155
Type: CAZyme
Location: 24933 - 27296 (+)
Type: CAZyme
Location: 24933 - 27296 (+)
Gene ID: HMPREF9456_RS11160
Type: STP
Location: 27393 - 28094 (-)
Type: STP
Location: 27393 - 28094 (-)
Gene ID: HMPREF9456_RS11165
Type: CAZyme
Location: 28397 - 29548 (-)
Type: CAZyme
Location: 28397 - 29548 (-)
Gene ID: HMPREF9456_RS11170
Type: CAZyme
Location: 29569 - 30852 (-)
Type: CAZyme
Location: 29569 - 30852 (-)
Gene ID: HMPREF9456_RS11175
Type: CAZyme
Location: 30866 - 31714 (-)
Type: CAZyme
Location: 30866 - 31714 (-)
Gene ID: HMPREF9456_RS11180
Type: CAZyme
Location: 31773 - 33128 (-)
Type: CAZyme
Location: 31773 - 33128 (-)
Gene ID: HMPREF9456_RS11185
Type: CAZyme
Location: 33149 - 34483 (-)
Type: CAZyme
Location: 33149 - 34483 (-)
Gene ID: HMPREF9456_RS11190
Type: CAZyme
Location: 34492 - 36432 (-)
Type: CAZyme
Location: 34492 - 36432 (-)
Gene ID: HMPREF9456_RS11195
Type: CAZyme
Location: 36465 - 38912 (-)
Type: CAZyme
Location: 36465 - 38912 (-)
Gene ID: HMPREF9456_RS11200
Type: TF
Location: 39048 - 42923 (-)
Type: TF
Location: 39048 - 42923 (-)
Gene ID: HMPREF9456_RS11205
Type: STP
Location: 43308 - 43895 (+)
Type: STP
Location: 43308 - 43895 (+)
Gene ID: HMPREF9456_RS11210
Type: CAZyme
Location: 44041 - 46473 (-)
Type: CAZyme
Location: 44041 - 46473 (-)
Gene ID: HMPREF9456_RS11215
Type: CAZyme
Location: 46513 - 47469 (-)
Type: CAZyme
Location: 46513 - 47469 (-)
Gene ID: HMPREF9456_RS11220
Type: CAZyme
Location: 47595 - 49565 (-)
Type: CAZyme
Location: 47595 - 49565 (-)
Gene ID: HMPREF9456_RS11225
Type: CAZyme
Location: 49668 - 51215 (-)
Type: CAZyme
Location: 49668 - 51215 (-)
Gene ID: HMPREF9456_RS11230
Type: CAZyme
Location: 52026 - 54545 (+)
Type: CAZyme
Location: 52026 - 54545 (+)
Gene ID: HMPREF9456_RS11235
Type: CAZyme
Location: 54557 - 56488 (+)
Type: CAZyme
Location: 54557 - 56488 (+)
Gene ID: HMPREF9456_RS11240
Type: TC
Location: 56501 - 57913 (+)
Type: TC
Location: 56501 - 57913 (+)
Gene ID: HMPREF9456_RS11245
Type: CAZyme
Location: 57939 - 59090 (+)
Type: CAZyme
Location: 57939 - 59090 (+)
Gene ID: HMPREF9456_RS11250
Type: CAZyme
Location: 59112 - 60086 (+)
Type: CAZyme
Location: 59112 - 60086 (+)
Gene ID: HMPREF9456_RS11255
Type: CAZyme
Location: 60190 - 62220 (+)
Type: CAZyme
Location: 60190 - 62220 (+)
Gene ID: HMPREF9456_RS11260
Type: pfam
Location: 62228 - 63400 (+)
Type: pfam
Location: 62228 - 63400 (+)
Gene ID: HMPREF9456_RS11265
Type: pfam
Location: 63397 - 64236 (+)
Type: pfam
Location: 63397 - 64236 (+)
Gene ID: HMPREF9456_RS11270
Type: TF
Location: 64559 - 68566 (-)
Type: TF
Location: 64559 - 68566 (-)
Gene ID: HMPREF9456_RS11275
Type: TC
Location: 69349 - 72540 (+)
Type: TC
Location: 69349 - 72540 (+)
Gene ID: HMPREF9456_RS11280
Type: TC
Location: 72560 - 74635 (+)
Type: TC
Location: 72560 - 74635 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas mossii
Gene Composition
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