Cluster: PUL0642
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate: alpha-glucan
- Genome ID: PUL0642
- CGC Family ID: CGCFAM_02945
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| STP | NZ_LR027880 | RIL182_RS20205 | 1 | 957 | - | PfkB |
| CAZyme | NZ_LR027880 | RIL182_RS20210 | 1523 | 3775 | - | GH36 |
| CAZyme | NZ_LR027880 | RIL182_RS20215 | 3800 | 5482 | - | GH13_31 |
| TF | NZ_LR027880 | RIL182_RS20220 | 5564 | 6541 | - | LacI |
| CAZyme | NZ_LR027880 | RIL182_RS20225 | 6529 | 8220 | - | GH32 |
| CAZyme | NZ_LR027880 | RIL182_RS20230 | 8396 | 9835 | - | GH13_18 |
| TC | NZ_LR027880 | RIL182_RS20235 | 9918 | 10781 | - | 3.A.1.1.45 |
| TC | NZ_LR027880 | RIL182_RS20240 | 10781 | 11659 | - | 3.A.1.1.45 |
| pfam | NZ_LR027880 | RIL182_RS20245 | 11793 | 13187 | - | SBP_bac_8 |
| CAZyme | NZ_LR027880 | RIL182_RS20250 | 13621 | 17739 | - | CBM22 | CBM86 | CBM9 | GH10 |
| CAZyme | NZ_LR027880 | RIL182_RS20255 | 18044 | 19897 | - | CBM61 | GH53 |
Gene ID: RIL182_RS20205
Type: STP
Location: 1 - 957 (-)
Type: STP
Location: 1 - 957 (-)
Gene ID: RIL182_RS20210
Type: CAZyme
Location: 1523 - 3775 (-)
Type: CAZyme
Location: 1523 - 3775 (-)
Gene ID: RIL182_RS20215
Type: CAZyme
Location: 3800 - 5482 (-)
Type: CAZyme
Location: 3800 - 5482 (-)
Gene ID: RIL182_RS20220
Type: TF
Location: 5564 - 6541 (-)
Type: TF
Location: 5564 - 6541 (-)
Gene ID: RIL182_RS20225
Type: CAZyme
Location: 6529 - 8220 (-)
Type: CAZyme
Location: 6529 - 8220 (-)
Gene ID: RIL182_RS20230
Type: CAZyme
Location: 8396 - 9835 (-)
Type: CAZyme
Location: 8396 - 9835 (-)
Gene ID: RIL182_RS20235
Type: TC
Location: 9918 - 10781 (-)
Type: TC
Location: 9918 - 10781 (-)
Gene ID: RIL182_RS20240
Type: TC
Location: 10781 - 11659 (-)
Type: TC
Location: 10781 - 11659 (-)
Gene ID: RIL182_RS20245
Type: pfam
Location: 11793 - 13187 (-)
Type: pfam
Location: 11793 - 13187 (-)
Gene ID: RIL182_RS20250
Type: CAZyme
Location: 13621 - 17739 (-)
Type: CAZyme
Location: 13621 - 17739 (-)
Gene ID: RIL182_RS20255
Type: CAZyme
Location: 18044 - 19897 (-)
Type: CAZyme
Location: 18044 - 19897 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Composition
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