Cluster: PUL0625
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 10
- Substrate: xylan
- Genome ID: PUL0625
- CGC Family ID: CGCFAM_00238
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | JABKKF010000013 | HPS56_11565 | 1 | 1650 | - | CBM91 | GH43_12 |
| CAZyme | JABKKF010000013 | HPS56_11570 | 1711 | 4212 | - | GH115 |
| CAZyme | JABKKF010000013 | HPS56_11575 | 4227 | 6323 | - | CBM91 | GH43_10 |
| CAZyme | JABKKF010000013 | HPS56_11580 | 6360 | 8264 | - | GH97 |
| CAZyme | JABKKF010000013 | HPS56_11585 | 8319 | 9689 | - | CBM6 | GH43_29 |
| CAZyme | JABKKF010000013 | HPS56_11590 | 9696 | 11561 | - | CE1 | CE1 |
| CAZyme | JABKKF010000013 | HPS56_11595 | 11577 | 14033 | - | GH95 |
| CAZyme | JABKKF010000013 | HPS56_11600 | 14043 | 16565 | - | GH115 |
| NULL(UNKNOWN) | JABKKF010000013 | HPS56_11610 | 19440 | 22811 | - | NULL(UNKNOWN) |
| TF | JABKKF010000013 | HPS56_11615 | 23319 | 27197 | - | HTH_8 | HTH_AraC |
| CAZyme | JABKKF010000013 | HPS56_11620 | 27592 | 28833 | - | CE1 |
| CAZyme | JABKKF010000013 | HPS56_11625 | 28862 | 30370 | - | GH30_8 |
| pfam | JABKKF010000013 | HPS56_11630 | 30367 | 32043 | - | SusD_RagB |
| peptidase | JABKKF010000013 | HPS56_11635 | 32053 | 35208 | - | I39.UPW |
| NULL(UNKNOWN) | JABKKF010000013 | HPS56_11640 | 35208 | 36827 | - | NULL(UNKNOWN) |
| pfam | JABKKF010000013 | HPS56_11645 | 36868 | 38796 | - | Fasciclin |
| STP | JABKKF010000013 | HPS56_11650 | 38828 | 40513 | - | TPR_1 |
| TC | JABKKF010000013 | HPS56_11655 | 40525 | 43779 | - | 1.B.14.6.1 |
Gene ID: HPS56_11565
Type: CAZyme
Location: 1 - 1650 (-)
Type: CAZyme
Location: 1 - 1650 (-)
Gene ID: HPS56_11570
Type: CAZyme
Location: 1711 - 4212 (-)
Type: CAZyme
Location: 1711 - 4212 (-)
Gene ID: HPS56_11575
Type: CAZyme
Location: 4227 - 6323 (-)
Type: CAZyme
Location: 4227 - 6323 (-)
Gene ID: HPS56_11580
Type: CAZyme
Location: 6360 - 8264 (-)
Type: CAZyme
Location: 6360 - 8264 (-)
Gene ID: HPS56_11585
Type: CAZyme
Location: 8319 - 9689 (-)
Type: CAZyme
Location: 8319 - 9689 (-)
Gene ID: HPS56_11590
Type: CAZyme
Location: 9696 - 11561 (-)
Type: CAZyme
Location: 9696 - 11561 (-)
Gene ID: HPS56_11595
Type: CAZyme
Location: 11577 - 14033 (-)
Type: CAZyme
Location: 11577 - 14033 (-)
Gene ID: HPS56_11600
Type: CAZyme
Location: 14043 - 16565 (-)
Type: CAZyme
Location: 14043 - 16565 (-)
Gene ID: HPS56_11610
Type: null
Location: 19440 - 22811 (-)
Type: null
Location: 19440 - 22811 (-)
Gene ID: HPS56_11615
Type: TF
Location: 23319 - 27197 (-)
Type: TF
Location: 23319 - 27197 (-)
Gene ID: HPS56_11620
Type: CAZyme
Location: 27592 - 28833 (-)
Type: CAZyme
Location: 27592 - 28833 (-)
Gene ID: HPS56_11625
Type: CAZyme
Location: 28862 - 30370 (-)
Type: CAZyme
Location: 28862 - 30370 (-)
Gene ID: HPS56_11630
Type: pfam
Location: 30367 - 32043 (-)
Type: pfam
Location: 30367 - 32043 (-)
Gene ID: HPS56_11635
Type: peptidase
Location: 32053 - 35208 (-)
Type: peptidase
Location: 32053 - 35208 (-)
Gene ID: HPS56_11640
Type: null
Location: 35208 - 36827 (-)
Type: null
Location: 35208 - 36827 (-)
Gene ID: HPS56_11645
Type: pfam
Location: 36868 - 38796 (-)
Type: pfam
Location: 36868 - 38796 (-)
Gene ID: HPS56_11650
Type: STP
Location: 38828 - 40513 (-)
Type: STP
Location: 38828 - 40513 (-)
Gene ID: HPS56_11655
Type: TC
Location: 40525 - 43779 (-)
Type: TC
Location: 40525 - 43779 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Palleniella
Species
Palleniella intestinalis
Gene Composition
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