Cluster: PUL0623
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: PUL0623
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | JABKKF010000001 | HPS56_01015 | 1 | 28 | + | Calycin_like |
| TC | JABKKF010000001 | HPS56_01020 | 1 | 2025 | + | 1.B.14.10.1 |
| pfam | JABKKF010000001 | HPS56_01025 | 2022 | 6269 | + | CobN-Mg_chel |
| NULL(UNKNOWN) | JABKKF010000001 | HPS56_01030 | 6269 | 6955 | + | NULL(UNKNOWN) |
| pfam | JABKKF010000001 | HPS56_01035 | 6952 | 7557 | + | MotA_ExbB |
| pfam | JABKKF010000001 | HPS56_01040 | 7554 | 7892 | + | DUF2149 |
| CAZyme | JABKKF010000001 | HPS56_01045 | 8038 | 10605 | - | GH3 |
| NULL(UNKNOWN) | JABKKF010000001 | HPS56_01050 | 11046 | 13397 | + | NULL(UNKNOWN) |
| TC | JABKKF010000001 | HPS56_01055 | 13417 | 16692 | + | 1.B.14.6.1 |
| TC | JABKKF010000001 | HPS56_01060 | 16709 | 18274 | + | 8.A.46.1.4 |
| pfam | JABKKF010000001 | HPS56_01065 | 18287 | 20050 | + | Fasciclin | Fasciclin | DUF5108 |
| NULL(UNKNOWN) | JABKKF010000001 | HPS56_01070 | 20066 | 21880 | + | NULL(UNKNOWN) |
| peptidase | JABKKF010000001 | HPS56_01075 | 21901 | 25020 | + | I39.UPW |
| NULL(UNKNOWN) | JABKKF010000001 | HPS56_01080 | 25029 | 26933 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | JABKKF010000001 | HPS56_01085 | 27040 | 29307 | + | NULL(UNKNOWN) |
Gene ID: HPS56_01015
Type: pfam
Location: 1 - 28 (+)
Type: pfam
Location: 1 - 28 (+)
Gene ID: HPS56_01020
Type: TC
Location: 1 - 2025 (+)
Type: TC
Location: 1 - 2025 (+)
Gene ID: HPS56_01025
Type: pfam
Location: 2022 - 6269 (+)
Type: pfam
Location: 2022 - 6269 (+)
Gene ID: HPS56_01030
Type: null
Location: 6269 - 6955 (+)
Type: null
Location: 6269 - 6955 (+)
Gene ID: HPS56_01035
Type: pfam
Location: 6952 - 7557 (+)
Type: pfam
Location: 6952 - 7557 (+)
Gene ID: HPS56_01040
Type: pfam
Location: 7554 - 7892 (+)
Type: pfam
Location: 7554 - 7892 (+)
Gene ID: HPS56_01045
Type: CAZyme
Location: 8038 - 10605 (-)
Type: CAZyme
Location: 8038 - 10605 (-)
Gene ID: HPS56_01050
Type: null
Location: 11046 - 13397 (+)
Type: null
Location: 11046 - 13397 (+)
Gene ID: HPS56_01055
Type: TC
Location: 13417 - 16692 (+)
Type: TC
Location: 13417 - 16692 (+)
Gene ID: HPS56_01060
Type: TC
Location: 16709 - 18274 (+)
Type: TC
Location: 16709 - 18274 (+)
Gene ID: HPS56_01065
Type: pfam
Location: 18287 - 20050 (+)
Type: pfam
Location: 18287 - 20050 (+)
Gene ID: HPS56_01070
Type: null
Location: 20066 - 21880 (+)
Type: null
Location: 20066 - 21880 (+)
Gene ID: HPS56_01075
Type: peptidase
Location: 21901 - 25020 (+)
Type: peptidase
Location: 21901 - 25020 (+)
Gene ID: HPS56_01080
Type: null
Location: 25029 - 26933 (+)
Type: null
Location: 25029 - 26933 (+)
Gene ID: HPS56_01085
Type: null
Location: 27040 - 29307 (+)
Type: null
Location: 27040 - 29307 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Palleniella
Species
Palleniella intestinalis
Gene Composition
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