Cluster: PUL0616
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: PUL0616
- CGC Family ID: CGCFAM_00136
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | JABKKG010000005 | HPS57_08295 | 1 | 2286 | - | SusD_RagB | SusD-like_3 |
| TC | JABKKG010000005 | HPS57_08300 | 2300 | 5644 | - | 1.B.14.6.1 |
| pfam | JABKKG010000005 | HPS57_08305 | 5697 | 7139 | - | DUF4957 | DUF4992 | DUF5123 |
| pfam | JABKKG010000005 | HPS57_08310 | 7221 | 8099 | - | AP_endonuc_2 |
| CAZyme | JABKKG010000005 | HPS57_08320 | 10997 | 11959 | + | PL1_2 |
| pfam | JABKKG010000005 | HPS57_08325 | 12143 | 13021 | + | AP_endonuc_2 |
| pfam | JABKKG010000005 | HPS57_08330 | 13236 | 14732 | + | DUF4957 | DUF4992 | DUF5123 |
| TC | JABKKG010000005 | HPS57_08335 | 14758 | 18078 | + | 1.B.14.6.2 |
| pfam | JABKKG010000005 | HPS57_08340 | 18117 | 20321 | + | SusD_RagB | SusD-like_3 |
Gene ID: HPS57_08295
Type: pfam
Location: 1 - 2286 (-)
Type: pfam
Location: 1 - 2286 (-)
Gene ID: HPS57_08300
Type: TC
Location: 2300 - 5644 (-)
Type: TC
Location: 2300 - 5644 (-)
Gene ID: HPS57_08305
Type: pfam
Location: 5697 - 7139 (-)
Type: pfam
Location: 5697 - 7139 (-)
Gene ID: HPS57_08310
Type: pfam
Location: 7221 - 8099 (-)
Type: pfam
Location: 7221 - 8099 (-)
Gene ID: HPS57_08320
Type: CAZyme
Location: 10997 - 11959 (+)
Type: CAZyme
Location: 10997 - 11959 (+)
Gene ID: HPS57_08325
Type: pfam
Location: 12143 - 13021 (+)
Type: pfam
Location: 12143 - 13021 (+)
Gene ID: HPS57_08330
Type: pfam
Location: 13236 - 14732 (+)
Type: pfam
Location: 13236 - 14732 (+)
Gene ID: HPS57_08335
Type: TC
Location: 14758 - 18078 (+)
Type: TC
Location: 14758 - 18078 (+)
Gene ID: HPS57_08340
Type: pfam
Location: 18117 - 20321 (+)
Type: pfam
Location: 18117 - 20321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Palleniella
Species
Palleniella intestinalis
Gene Composition
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