Cluster: PUL0612
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: PUL0612
- CGC Family ID: CGCFAM_06447
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RHLF01000001 | ED555_05795 | 1 | 1590 | + | 2.A.21.3.21 |
| TC | RHLF01000001 | ED555_05800 | 1660 | 3291 | - | 8.A.46.1.1 |
| TC | RHLF01000001 | ED555_05805 | 3312 | 6440 | - | 1.B.14.6.1 |
| TF | RHLF01000001 | ED555_05810 | 6808 | 7830 | + | LacI |
| CAZyme | RHLF01000001 | ED555_05815 | 7864 | 10167 | + | GH65 |
| CAZyme | RHLF01000001 | ED555_05820 | 10164 | 12035 | + | GH13_38 |
| NULL(UNKNOWN) | RHLF01000001 | ED555_05825 | 12082 | 12504 | - | NULL(UNKNOWN) |
| pfam | RHLF01000001 | ED555_05830 | 12691 | 13443 | + | GDPD |
| STP | RHLF01000001 | ED555_05835 | 13443 | 14714 | + | Pyr_redox_2 |
| TC | RHLF01000001 | ED555_05840 | 14711 | 15442 | - | 1.A.8.2.9 |
| pfam | RHLF01000001 | ED555_05845 | 15453 | 16949 | - | FGGY_N | FGGY_C |
Gene ID: ED555_05795
Type: TC
Location: 1 - 1590 (+)
Type: TC
Location: 1 - 1590 (+)
Gene ID: ED555_05800
Type: TC
Location: 1660 - 3291 (-)
Type: TC
Location: 1660 - 3291 (-)
Gene ID: ED555_05805
Type: TC
Location: 3312 - 6440 (-)
Type: TC
Location: 3312 - 6440 (-)
Gene ID: ED555_05810
Type: TF
Location: 6808 - 7830 (+)
Type: TF
Location: 6808 - 7830 (+)
Gene ID: ED555_05815
Type: CAZyme
Location: 7864 - 10167 (+)
Type: CAZyme
Location: 7864 - 10167 (+)
Gene ID: ED555_05820
Type: CAZyme
Location: 10164 - 12035 (+)
Type: CAZyme
Location: 10164 - 12035 (+)
Gene ID: ED555_05825
Type: null
Location: 12082 - 12504 (-)
Type: null
Location: 12082 - 12504 (-)
Gene ID: ED555_05830
Type: pfam
Location: 12691 - 13443 (+)
Type: pfam
Location: 12691 - 13443 (+)
Gene ID: ED555_05835
Type: STP
Location: 13443 - 14714 (+)
Type: STP
Location: 13443 - 14714 (+)
Gene ID: ED555_05840
Type: TC
Location: 14711 - 15442 (-)
Type: TC
Location: 14711 - 15442 (-)
Gene ID: ED555_05845
Type: pfam
Location: 15453 - 16949 (-)
Type: pfam
Location: 15453 - 16949 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Allomuricauda
Species
Allomuricauda sp.
Gene Composition
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