Cluster: PUL0611
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate: alpha-glucan
- Genome ID: PUL0611
- CGC Family ID: CGCFAM_01242
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RHLG01000001 | ED556_00425 | 1 | 2124 | - | GH97 |
| CAZyme | RHLG01000001 | ED556_00430 | 2127 | 3806 | - | GH13_19 |
| CAZyme | RHLG01000001 | ED556_00435 | 3811 | 5709 | - | GH13_38 |
| CAZyme | RHLG01000001 | ED556_00440 | 5716 | 8148 | - | GH31 |
| CAZyme | RHLG01000001 | ED556_00445 | 8225 | 9199 | - | CE1 |
| CAZyme | RHLG01000001 | ED556_00450 | 9202 | 11160 | - | GH13_46 |
| CAZyme | RHLG01000001 | ED556_00455 | 11205 | 13511 | - | GH65 |
| pfam | RHLG01000001 | ED556_00460 | 13538 | 14224 | - | Hydrolase | HAD_2 |
| TC | RHLG01000001 | ED556_00465 | 14217 | 15581 | - | 2.A.2.6.3 |
| TF | RHLG01000001 | ED556_00470 | 15715 | 16755 | - | LacI |
| TC | RHLG01000001 | ED556_00475 | 17031 | 19943 | + | 1.B.14.6.1 |
| TC | RHLG01000001 | ED556_00480 | 19950 | 21554 | + | 8.A.46.1.1 |
| pfam | RHLG01000001 | ED556_00485 | 21567 | 22664 | + | SusE | SusF_SusE |
| pfam | RHLG01000001 | ED556_00490 | 22675 | 24138 | + | SusE | SusE | SusF_SusE |
Gene ID: ED556_00425
Type: CAZyme
Location: 1 - 2124 (-)
Type: CAZyme
Location: 1 - 2124 (-)
Gene ID: ED556_00430
Type: CAZyme
Location: 2127 - 3806 (-)
Type: CAZyme
Location: 2127 - 3806 (-)
Gene ID: ED556_00435
Type: CAZyme
Location: 3811 - 5709 (-)
Type: CAZyme
Location: 3811 - 5709 (-)
Gene ID: ED556_00440
Type: CAZyme
Location: 5716 - 8148 (-)
Type: CAZyme
Location: 5716 - 8148 (-)
Gene ID: ED556_00445
Type: CAZyme
Location: 8225 - 9199 (-)
Type: CAZyme
Location: 8225 - 9199 (-)
Gene ID: ED556_00450
Type: CAZyme
Location: 9202 - 11160 (-)
Type: CAZyme
Location: 9202 - 11160 (-)
Gene ID: ED556_00455
Type: CAZyme
Location: 11205 - 13511 (-)
Type: CAZyme
Location: 11205 - 13511 (-)
Gene ID: ED556_00460
Type: pfam
Location: 13538 - 14224 (-)
Type: pfam
Location: 13538 - 14224 (-)
Gene ID: ED556_00465
Type: TC
Location: 14217 - 15581 (-)
Type: TC
Location: 14217 - 15581 (-)
Gene ID: ED556_00470
Type: TF
Location: 15715 - 16755 (-)
Type: TF
Location: 15715 - 16755 (-)
Gene ID: ED556_00475
Type: TC
Location: 17031 - 19943 (+)
Type: TC
Location: 17031 - 19943 (+)
Gene ID: ED556_00480
Type: TC
Location: 19950 - 21554 (+)
Type: TC
Location: 19950 - 21554 (+)
Gene ID: ED556_00485
Type: pfam
Location: 21567 - 22664 (+)
Type: pfam
Location: 21567 - 22664 (+)
Gene ID: ED556_00490
Type: pfam
Location: 22675 - 24138 (+)
Type: pfam
Location: 22675 - 24138 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Winogradskyella
Species
Winogradskyella sp.
Gene Composition
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