Cluster: PUL0608
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: PUL0608
- CGC Family ID: CGCFAM_00312
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | NC_015977 | RHOM_RS04015 | 1 | 867 | - | HTH_AraC | HTH_AraC |
| TC | NC_015977 | RHOM_RS04020 | 1297 | 2661 | + | 3.A.1.1.4 |
| TC | NC_015977 | RHOM_RS04025 | 2826 | 3704 | + | 3.A.1.1.4 |
| TC | NC_015977 | RHOM_RS04030 | 3775 | 4503 | + | 3.A.1.1.4 |
| NULL(UNKNOWN) | NC_015977 | RHOM_RS04035 | 4500 | 4940 | + | NULL(UNKNOWN) |
| CAZyme | NC_015977 | RHOM_RS04040 | 4891 | 6192 | + | GH136 |
| CAZyme | NC_015977 | RHOM_RS04045 | 6238 | 8400 | + | GH112 |
| TF | NC_015977 | RHOM_RS04050 | 8424 | 10022 | - | HTH_AraC | HTH_AraC |
| TC | NC_015977 | RHOM_RS04055 | 10066 | 11841 | - | 8.A.59.2.1 |
Gene ID: RHOM_RS04015
Type: TF
Location: 1 - 867 (-)
Type: TF
Location: 1 - 867 (-)
Gene ID: RHOM_RS04020
Type: TC
Location: 1297 - 2661 (+)
Type: TC
Location: 1297 - 2661 (+)
Gene ID: RHOM_RS04025
Type: TC
Location: 2826 - 3704 (+)
Type: TC
Location: 2826 - 3704 (+)
Gene ID: RHOM_RS04030
Type: TC
Location: 3775 - 4503 (+)
Type: TC
Location: 3775 - 4503 (+)
Gene ID: RHOM_RS04035
Type: null
Location: 4500 - 4940 (+)
Type: null
Location: 4500 - 4940 (+)
Gene ID: RHOM_RS04040
Type: CAZyme
Location: 4891 - 6192 (+)
Type: CAZyme
Location: 4891 - 6192 (+)
Gene ID: RHOM_RS04045
Type: CAZyme
Location: 6238 - 8400 (+)
Type: CAZyme
Location: 6238 - 8400 (+)
Gene ID: RHOM_RS04050
Type: TF
Location: 8424 - 10022 (-)
Type: TF
Location: 8424 - 10022 (-)
Gene ID: RHOM_RS04055
Type: TC
Location: 10066 - 11841 (-)
Type: TC
Location: 10066 - 11841 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Composition
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