Cluster: PUL0601
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: PUL0601
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | CP002160 | Clocel_2249 | 1 | 1407 | - | UxaC |
| pfam | CP002160 | Clocel_2250 | 1421 | 2908 | - | GD_AH_second | SAF | GD_AH_C |
| pfam | CP002160 | Clocel_2251 | 2901 | 4370 | - | Mannitol_dh | Mannitol_dh_C |
| CAZyme | CP002160 | Clocel_2252 | 4426 | 5256 | - | CE4 |
| TF | CP002160 | Clocel_2253 | 5891 | 6586 | - | GntR |
| CAZyme | CP002160 | Clocel_2254 | 6682 | 8214 | - | GH28 |
| TC | CP002160 | Clocel_2255 | 8462 | 9970 | - | 2.A.2.5.1 |
| CAZyme | CP002160 | Clocel_2256 | 10054 | 11142 | - | GH105 |
| pfam | CP002160 | Clocel_2257 | 11736 | 12572 | - | AP_endonuc_2 |
| pfam | CP002160 | Clocel_2258 | 12668 | 13294 | - | Aldolase |
| STP | CP002160 | Clocel_2259 | 13367 | 14314 | - | PfkB |
| sulfatase | CP002160 | Clocel_2260 | 14471 | 15253 | - | S1_4 |
| sulfatase | CP002160 | Clocel_2262 | 16047 | 16850 | - | S1_2 |
| pfam | CP002160 | Clocel_2263 | 17121 | 17951 | - | KduI |
| TF | CP002160 | Clocel_2264 | 18387 | 19148 | - | TrmB |
Gene ID: Clocel_2249
Type: pfam
Location: 1 - 1407 (-)
Type: pfam
Location: 1 - 1407 (-)
Gene ID: Clocel_2250
Type: pfam
Location: 1421 - 2908 (-)
Type: pfam
Location: 1421 - 2908 (-)
Gene ID: Clocel_2251
Type: pfam
Location: 2901 - 4370 (-)
Type: pfam
Location: 2901 - 4370 (-)
Gene ID: Clocel_2252
Type: CAZyme
Location: 4426 - 5256 (-)
Type: CAZyme
Location: 4426 - 5256 (-)
Gene ID: Clocel_2253
Type: TF
Location: 5891 - 6586 (-)
Type: TF
Location: 5891 - 6586 (-)
Gene ID: Clocel_2254
Type: CAZyme
Location: 6682 - 8214 (-)
Type: CAZyme
Location: 6682 - 8214 (-)
Gene ID: Clocel_2255
Type: TC
Location: 8462 - 9970 (-)
Type: TC
Location: 8462 - 9970 (-)
Gene ID: Clocel_2256
Type: CAZyme
Location: 10054 - 11142 (-)
Type: CAZyme
Location: 10054 - 11142 (-)
Gene ID: Clocel_2257
Type: pfam
Location: 11736 - 12572 (-)
Type: pfam
Location: 11736 - 12572 (-)
Gene ID: Clocel_2258
Type: pfam
Location: 12668 - 13294 (-)
Type: pfam
Location: 12668 - 13294 (-)
Gene ID: Clocel_2259
Type: STP
Location: 13367 - 14314 (-)
Type: STP
Location: 13367 - 14314 (-)
Gene ID: Clocel_2260
Type: sulfatase
Location: 14471 - 15253 (-)
Type: sulfatase
Location: 14471 - 15253 (-)
Gene ID: Clocel_2262
Type: sulfatase
Location: 16047 - 16850 (-)
Type: sulfatase
Location: 16047 - 16850 (-)
Gene ID: Clocel_2263
Type: pfam
Location: 17121 - 17951 (-)
Type: pfam
Location: 17121 - 17951 (-)
Gene ID: Clocel_2264
Type: TF
Location: 18387 - 19148 (-)
Type: TF
Location: 18387 - 19148 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium cellulovorans
Gene Composition
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