Cluster: PUL0576_B137.CMAG_3_C0
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: B137.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0576_B137.CMAG_3_C0 | B137_contig_801_1637 | 2082836 | 2084143 | + | 3.A.1.1.48 |
| TC | PUL0576_B137.CMAG_3_C0 | B137_contig_801_1638 | 2084320 | 2085291 | + | 3.A.1.1.48 |
| TC | PUL0576_B137.CMAG_3_C0 | B137_contig_801_1639 | 2085291 | 2086241 | + | 3.A.1.1.48 |
| CAZyme | PUL0576_B137.CMAG_3_C0 | B137_contig_801_1640 | 2086493 | 2088748 | + | GH112 |
| pfam | PUL0576_B137.CMAG_3_C0 | B137_contig_801_1641 | 2088977 | 2089918 | + | ROK |
| TF | PUL0576_B137.CMAG_3_C0 | B137_contig_801_1642 | 2090061 | 2091215 | - | 0043669 |
| pfam | PUL0576_B137.CMAG_3_C0 | B137_contig_801_1643 | 2091505 | 2092593 | + | APH |
| pfam | PUL0576_B137.CMAG_3_C0 | B137_contig_801_1644 | 2092593 | 2094107 | + | GalP_UDP_transf |
| pfam | PUL0576_B137.CMAG_3_C0 | B137_contig_801_1645 | 2094153 | 2095175 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
Gene ID: B137_contig_801_1637
Type: TC
Location: 2082836 - 2084143 (+)
Type: TC
Location: 2082836 - 2084143 (+)
Gene ID: B137_contig_801_1638
Type: TC
Location: 2084320 - 2085291 (+)
Type: TC
Location: 2084320 - 2085291 (+)
Gene ID: B137_contig_801_1639
Type: TC
Location: 2085291 - 2086241 (+)
Type: TC
Location: 2085291 - 2086241 (+)
Gene ID: B137_contig_801_1640
Type: CAZyme
Location: 2086493 - 2088748 (+)
Type: CAZyme
Location: 2086493 - 2088748 (+)
Gene ID: B137_contig_801_1641
Type: pfam
Location: 2088977 - 2089918 (+)
Type: pfam
Location: 2088977 - 2089918 (+)
Gene ID: B137_contig_801_1642
Type: TF
Location: 2090061 - 2091215 (-)
Type: TF
Location: 2090061 - 2091215 (-)
Gene ID: B137_contig_801_1643
Type: pfam
Location: 2091505 - 2092593 (+)
Type: pfam
Location: 2091505 - 2092593 (+)
Gene ID: B137_contig_801_1644
Type: pfam
Location: 2092593 - 2094107 (+)
Type: pfam
Location: 2092593 - 2094107 (+)
Gene ID: B137_contig_801_1645
Type: pfam
Location: 2094153 - 2095175 (+)
Type: pfam
Location: 2094153 - 2095175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium bifidum
Gene Composition
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