Cluster: PUL0572
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate: alginate
- Genome ID: PUL0572
- CGC Family ID: CGCFAM_01485
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| STP | CP007224 | PA96_1392 | 1 | 1446 | - | AraC_binding |
| pfam | CP007224 | PA96_1393 | 1644 | 2294 | - | AlgF |
| pfam | CP007224 | PA96_1394 | 2367 | 3542 | - | ALGX |
| TC | CP007224 | PA96_1395 | 3557 | 5119 | - | 2.A.50.2.1 |
| CAZyme | CP007224 | PA96_1396 | 5361 | 6464 | - | PL5_1 |
| pfam | CP007224 | PA96_1397 | 6468 | 7892 | - | ALGX | CBM_26 |
| pfam | CP007224 | PA96_1398 | 7905 | 9536 | - | NosD | Beta_helix |
| TC | CP007224 | PA96_1399 | 9557 | 11029 | - | 1.B.13.1.1 |
| pfam | CP007224 | PA96_1400 | 11026 | 12453 | - | Sel1 | Sel1 | Sel1 |
| pfam | CP007224 | PA96_1401 | 12467 | 13636 | - | PilZ | HlyD_3 |
| CAZyme | CP007224 | PA96_1402 | 13719 | 15200 | - | GT2 |
| pfam | CP007224 | PA96_1403 | 15343 | 16653 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
Gene ID: PA96_1392
Type: STP
Location: 1 - 1446 (-)
Type: STP
Location: 1 - 1446 (-)
Gene ID: PA96_1393
Type: pfam
Location: 1644 - 2294 (-)
Type: pfam
Location: 1644 - 2294 (-)
Gene ID: PA96_1394
Type: pfam
Location: 2367 - 3542 (-)
Type: pfam
Location: 2367 - 3542 (-)
Gene ID: PA96_1395
Type: TC
Location: 3557 - 5119 (-)
Type: TC
Location: 3557 - 5119 (-)
Gene ID: PA96_1396
Type: CAZyme
Location: 5361 - 6464 (-)
Type: CAZyme
Location: 5361 - 6464 (-)
Gene ID: PA96_1397
Type: pfam
Location: 6468 - 7892 (-)
Type: pfam
Location: 6468 - 7892 (-)
Gene ID: PA96_1398
Type: pfam
Location: 7905 - 9536 (-)
Type: pfam
Location: 7905 - 9536 (-)
Gene ID: PA96_1399
Type: TC
Location: 9557 - 11029 (-)
Type: TC
Location: 9557 - 11029 (-)
Gene ID: PA96_1400
Type: pfam
Location: 11026 - 12453 (-)
Type: pfam
Location: 11026 - 12453 (-)
Gene ID: PA96_1401
Type: pfam
Location: 12467 - 13636 (-)
Type: pfam
Location: 12467 - 13636 (-)
Gene ID: PA96_1402
Type: CAZyme
Location: 13719 - 15200 (-)
Type: CAZyme
Location: 13719 - 15200 (-)
Gene ID: PA96_1403
Type: pfam
Location: 15343 - 16653 (-)
Type: pfam
Location: 15343 - 16653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Species
Pseudomonas aeruginosa
Gene Composition
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