Cluster: PUL0571_HRGMv2_4162_C13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: chitin
- Genome ID: HRGMv2_4162
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0571_HRGMv2_4162_C13 | HRGMv2_4162_1_123 | 121290 | 122645 | - | GH4 |
| TF | PUL0571_HRGMv2_4162_C13 | HRGMv2_4162_1_124 | 122757 | 123575 | - | HTH_AraC | HTH_AraC |
| TC | PUL0571_HRGMv2_4162_C13 | HRGMv2_4162_1_125 | 123605 | 123952 | - | 4.A.3.2.1 |
| TC | PUL0571_HRGMv2_4162_C13 | HRGMv2_4162_1_126 | 124000 | 125358 | - | 4.A.3.2.1 |
| TC | PUL0571_HRGMv2_4162_C13 | HRGMv2_4162_1_127 | 125438 | 125758 | - | 4.A.3.2.1 |
| pfam | PUL0571_HRGMv2_4162_C13 | HRGMv2_4162_1_128 | 126011 | 126355 | - | BamE |
| pfam | PUL0571_HRGMv2_4162_C13 | HRGMv2_4162_1_129 | 126583 | 127410 | + | NAD_synthase |
Gene ID: HRGMv2_4162_1_123
Type: CAZyme
Location: 121290 - 122645 (-)
Type: CAZyme
Location: 121290 - 122645 (-)
Gene ID: HRGMv2_4162_1_124
Type: TF
Location: 122757 - 123575 (-)
Type: TF
Location: 122757 - 123575 (-)
Gene ID: HRGMv2_4162_1_125
Type: TC
Location: 123605 - 123952 (-)
Type: TC
Location: 123605 - 123952 (-)
Gene ID: HRGMv2_4162_1_126
Type: TC
Location: 124000 - 125358 (-)
Type: TC
Location: 124000 - 125358 (-)
Gene ID: HRGMv2_4162_1_127
Type: TC
Location: 125438 - 125758 (-)
Type: TC
Location: 125438 - 125758 (-)
Gene ID: HRGMv2_4162_1_128
Type: pfam
Location: 126011 - 126355 (-)
Type: pfam
Location: 126011 - 126355 (-)
Gene ID: HRGMv2_4162_1_129
Type: pfam
Location: 126583 - 127410 (+)
Type: pfam
Location: 126583 - 127410 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Lelliottia
Species
Lelliottia chinensis
Gene Composition
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