Cluster: PUL0571_HRGMv2_1878_C7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: chitin
- Genome ID: HRGMv2_1878
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0571_HRGMv2_1878_C7 | HRGMv2_1878_3_49 | 53599 | 54426 | - | NAD_synthase |
| pfam | PUL0571_HRGMv2_1878_C7 | HRGMv2_1878_3_50 | 54658 | 54999 | + | BamE |
| TC | PUL0571_HRGMv2_1878_C7 | HRGMv2_1878_3_51 | 55271 | 55588 | + | 4.A.3.2.1 |
| TC | PUL0571_HRGMv2_1878_C7 | HRGMv2_1878_3_52 | 55673 | 57031 | + | 4.A.3.2.1 |
| TC | PUL0571_HRGMv2_1878_C7 | HRGMv2_1878_3_53 | 57078 | 57434 | + | 4.A.3.2.7 |
| TF | PUL0571_HRGMv2_1878_C7 | HRGMv2_1878_3_54 | 57463 | 58281 | + | HTH_AraC | HTH_AraC |
| CAZyme | PUL0571_HRGMv2_1878_C7 | HRGMv2_1878_3_55 | 58385 | 59740 | + | GH4 |
Gene ID: HRGMv2_1878_3_49
Type: pfam
Location: 53599 - 54426 (-)
Type: pfam
Location: 53599 - 54426 (-)
Gene ID: HRGMv2_1878_3_50
Type: pfam
Location: 54658 - 54999 (+)
Type: pfam
Location: 54658 - 54999 (+)
Gene ID: HRGMv2_1878_3_51
Type: TC
Location: 55271 - 55588 (+)
Type: TC
Location: 55271 - 55588 (+)
Gene ID: HRGMv2_1878_3_52
Type: TC
Location: 55673 - 57031 (+)
Type: TC
Location: 55673 - 57031 (+)
Gene ID: HRGMv2_1878_3_53
Type: TC
Location: 57078 - 57434 (+)
Type: TC
Location: 57078 - 57434 (+)
Gene ID: HRGMv2_1878_3_54
Type: TF
Location: 57463 - 58281 (+)
Type: TF
Location: 57463 - 58281 (+)
Gene ID: HRGMv2_1878_3_55
Type: CAZyme
Location: 58385 - 59740 (+)
Type: CAZyme
Location: 58385 - 59740 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Leclercia
Species
Leclercia adecarboxylata
Gene Composition
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