Cluster: PUL0571_HRGMv2_1802_C32
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: chitin
- Genome ID: HRGMv2_1802
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0571_HRGMv2_1802_C32 | HRGMv2_1802_25_33 | 30226 | 31056 | - | NAD_synthase |
| pfam | PUL0571_HRGMv2_1802_C32 | HRGMv2_1802_25_34 | 31267 | 31608 | + | BamE |
| TC | PUL0571_HRGMv2_1802_C32 | HRGMv2_1802_25_35 | 31907 | 32227 | + | 4.A.3.2.1 |
| TC | PUL0571_HRGMv2_1802_C32 | HRGMv2_1802_25_36 | 32314 | 33672 | + | 4.A.3.2.1 |
| TC | PUL0571_HRGMv2_1802_C32 | HRGMv2_1802_25_37 | 33727 | 34074 | + | 4.A.3.2.1 |
| TF | PUL0571_HRGMv2_1802_C32 | HRGMv2_1802_25_38 | 34088 | 34927 | + | HTH_AraC | HTH_AraC |
| CAZyme | PUL0571_HRGMv2_1802_C32 | HRGMv2_1802_25_39 | 35052 | 36407 | + | GH4 |
| pfam | PUL0571_HRGMv2_1802_C32 | HRGMv2_1802_25_40 | 36420 | 37178 | + | YdjC |
Gene ID: HRGMv2_1802_25_33
Type: pfam
Location: 30226 - 31056 (-)
Type: pfam
Location: 30226 - 31056 (-)
Gene ID: HRGMv2_1802_25_34
Type: pfam
Location: 31267 - 31608 (+)
Type: pfam
Location: 31267 - 31608 (+)
Gene ID: HRGMv2_1802_25_35
Type: TC
Location: 31907 - 32227 (+)
Type: TC
Location: 31907 - 32227 (+)
Gene ID: HRGMv2_1802_25_36
Type: TC
Location: 32314 - 33672 (+)
Type: TC
Location: 32314 - 33672 (+)
Gene ID: HRGMv2_1802_25_37
Type: TC
Location: 33727 - 34074 (+)
Type: TC
Location: 33727 - 34074 (+)
Gene ID: HRGMv2_1802_25_38
Type: TF
Location: 34088 - 34927 (+)
Type: TF
Location: 34088 - 34927 (+)
Gene ID: HRGMv2_1802_25_39
Type: CAZyme
Location: 35052 - 36407 (+)
Type: CAZyme
Location: 35052 - 36407 (+)
Gene ID: HRGMv2_1802_25_40
Type: pfam
Location: 36420 - 37178 (+)
Type: pfam
Location: 36420 - 37178 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter meridianamericanus
Gene Composition
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