Cluster: PUL0565_HRGMv2_3983_C0
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate: beta-mannan
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_00333
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_5 | 4419 | 8426 | - | HTH_AraC | HTH_AraC |
| TC | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_6 | 8681 | 11929 | + | 1.B.14.6.1 |
| pfam | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_7 | 11956 | 13767 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_8 | 13818 | 14993 | + | TIG | SGBP_B_XBD |
| CAZyme | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_9 | 15013 | 16095 | + | GH26 |
| CAZyme | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_10 | 16113 | 17213 | + | GH26 |
| CAZyme | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_11 | 17223 | 19430 | + | GH36 |
| CAZyme | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_12 | 19474 | 20646 | + | GH130_1 |
| TC | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_13 | 20676 | 22049 | + | 2.A.2.3.6 |
| pfam | PUL0565_HRGMv2_3983_C0 | HRGMv2_3983_59_14 | 22062 | 23252 | + | GlcNAc_2-epim |
Gene ID: HRGMv2_3983_59_5
Type: TF
Location: 4419 - 8426 (-)
Type: TF
Location: 4419 - 8426 (-)
Gene ID: HRGMv2_3983_59_6
Type: TC
Location: 8681 - 11929 (+)
Type: TC
Location: 8681 - 11929 (+)
Gene ID: HRGMv2_3983_59_7
Type: pfam
Location: 11956 - 13767 (+)
Type: pfam
Location: 11956 - 13767 (+)
Gene ID: HRGMv2_3983_59_8
Type: pfam
Location: 13818 - 14993 (+)
Type: pfam
Location: 13818 - 14993 (+)
Gene ID: HRGMv2_3983_59_9
Type: CAZyme
Location: 15013 - 16095 (+)
Type: CAZyme
Location: 15013 - 16095 (+)
Gene ID: HRGMv2_3983_59_10
Type: CAZyme
Location: 16113 - 17213 (+)
Type: CAZyme
Location: 16113 - 17213 (+)
Gene ID: HRGMv2_3983_59_11
Type: CAZyme
Location: 17223 - 19430 (+)
Type: CAZyme
Location: 17223 - 19430 (+)
Gene ID: HRGMv2_3983_59_12
Type: CAZyme
Location: 19474 - 20646 (+)
Type: CAZyme
Location: 19474 - 20646 (+)
Gene ID: HRGMv2_3983_59_13
Type: TC
Location: 20676 - 22049 (+)
Type: TC
Location: 20676 - 22049 (+)
Gene ID: HRGMv2_3983_59_14
Type: pfam
Location: 22062 - 23252 (+)
Type: pfam
Location: 22062 - 23252 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Composition
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