dbCAN HGM

Cluster: PUL0564

Cluster Details
Gene Composition
Taxonomic Lineage
Gene Composition

🧬 Cluster Details

Gene Count: 39
CAZyme Count: 22
Substrate: pectin
Genome ID: PUL0564
Continent: NA
Source Study: dbCAN-PUL Database →

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	AE015928	BT_4145	1	2775	-	GH106
CAZyme	AE015928	BT_4146	2775	4178	-	GH28
pfam	AE015928	BT_4147	4268	4858	-	DUF4450
NULL(UNKNOWN)	AE015928	BT_4148	4809	5024	-	NULL(UNKNOWN)
CAZyme	AE015928	BT_4149	5270	6328	-	GH28
CAZyme	AE015928	BT_4150	6353	7591	-	CE12
CAZyme	AE015928	BT_4151	7609	10485	-	GH2
CAZyme	AE015928	BT_4152	10749	13709	+	GH42 \| GH43_18
CAZyme	AE015928	BT_4153	13753	15051	+	GH28
CAZyme	AE015928	BT_4154	15064	16032	+	CE4
CAZyme	AE015928	BT_4155	16099	17445	+	GH28
CAZyme	AE015928	BT_4156	17570	20455	-	GH2
CAZyme	AE015928	BT_4157	20480	22300	-	GH27
pfam	AE015928	BT_4158	22307	22999	+	Lipase_GDSL_2
NULL(UNKNOWN)	AE015928	BT_4159	23270	24901	+	NULL(UNKNOWN)
CAZyme	AE015928	BT_4160	24930	27026	+	GH35
pfam	AE015928	BT_4161	27165	27767	-	HU-HIG
pfam	AE015928	BT_4162	28180	30258	+	VapE-like_dom \| BT4734-like_N \| DUF3874 \| DUF5906
pfam	AE015928	BT_4163	30898	33150	+	Fasciclin
TC	AE015928	BT_4164	33169	36435	+	1.B.14.6.1
TC	AE015928	BT_4165	36475	38034	+	8.A.46.1.4
pfam	AE015928	BT_4166	38043	39788	+	Fasciclin \| DUF5108
NULL(UNKNOWN)	AE015928	BT_4167	39794	41536	+	NULL(UNKNOWN)
TC	AE015928	BT_4168	41553	44705	+	1.B.14.6.2
NULL(UNKNOWN)	AE015928	BT_4169	44711	46462	+	NULL(UNKNOWN)
CAZyme	AE015928	BT_4170	46495	48102	+	PL9
NULL(UNKNOWN)	AE015928	BT_4171	48124	48777	+	NULL(UNKNOWN)
CAZyme	AE015928	BT_4172	49030	52326	+	PL26
CAZyme	AE015928	BT_4173	52405	53979	-	CE12 \| CE12
CAZyme	AE015928	BT_4174	54040	55200	-	GH105
CAZyme	AE015928	BT_4175	55467	57308	+	PL11_1
CAZyme	AE015928	BT_4176	57312	58709	+	GH105
pfam	AE015928	BT_4177	58740	59054	+	rhaM
TF	AE015928	BT_4178	59197	63498	+	HTH_AraC \| HTH_AraC
CAZyme	AE015928	BT_4179	63808	65433	+	CE4
CAZyme	AE015928	BT_4180	65481	66284	+	CE6
CAZyme	AE015928	BT_4181	66937	69906	-	GH2
TF	AE015928	BT_4182	69994	74289	-	HTH_AraC
CAZyme	AE015928	BT_4183	74634	75947	+	PL9_1

Gene ID: BT_4145
Type: CAZyme
Location: 1 - 2775 (-)

Gene ID: BT_4146
Type: CAZyme
Location: 2775 - 4178 (-)

Gene ID: BT_4147
Type: pfam
Location: 4268 - 4858 (-)

Gene ID: BT_4148
Type: null
Location: 4809 - 5024 (-)

Gene ID: BT_4149
Type: CAZyme
Location: 5270 - 6328 (-)

Gene ID: BT_4150
Type: CAZyme
Location: 6353 - 7591 (-)

Gene ID: BT_4151
Type: CAZyme
Location: 7609 - 10485 (-)

Gene ID: BT_4152
Type: CAZyme
Location: 10749 - 13709 (+)

Gene ID: BT_4153
Type: CAZyme
Location: 13753 - 15051 (+)

Gene ID: BT_4154
Type: CAZyme
Location: 15064 - 16032 (+)

Gene ID: BT_4155
Type: CAZyme
Location: 16099 - 17445 (+)

Gene ID: BT_4156
Type: CAZyme
Location: 17570 - 20455 (-)

Gene ID: BT_4157
Type: CAZyme
Location: 20480 - 22300 (-)

Gene ID: BT_4158
Type: pfam
Location: 22307 - 22999 (+)

Gene ID: BT_4159
Type: null
Location: 23270 - 24901 (+)

Gene ID: BT_4160
Type: CAZyme
Location: 24930 - 27026 (+)

Gene ID: BT_4161
Type: pfam
Location: 27165 - 27767 (-)

Gene ID: BT_4162
Type: pfam
Location: 28180 - 30258 (+)

Gene ID: BT_4163
Type: pfam
Location: 30898 - 33150 (+)

Gene ID: BT_4164
Type: TC
Location: 33169 - 36435 (+)

Gene ID: BT_4165
Type: TC
Location: 36475 - 38034 (+)

Gene ID: BT_4166
Type: pfam
Location: 38043 - 39788 (+)

Gene ID: BT_4167
Type: null
Location: 39794 - 41536 (+)

Gene ID: BT_4168
Type: TC
Location: 41553 - 44705 (+)

Gene ID: BT_4169
Type: null
Location: 44711 - 46462 (+)

Gene ID: BT_4170
Type: CAZyme
Location: 46495 - 48102 (+)

Gene ID: BT_4171
Type: null
Location: 48124 - 48777 (+)

Gene ID: BT_4172
Type: CAZyme
Location: 49030 - 52326 (+)

Gene ID: BT_4173
Type: CAZyme
Location: 52405 - 53979 (-)

Gene ID: BT_4174
Type: CAZyme
Location: 54040 - 55200 (-)

Gene ID: BT_4175
Type: CAZyme
Location: 55467 - 57308 (+)

Gene ID: BT_4176
Type: CAZyme
Location: 57312 - 58709 (+)

Gene ID: BT_4177
Type: pfam
Location: 58740 - 59054 (+)

Gene ID: BT_4178
Type: TF
Location: 59197 - 63498 (+)

Gene ID: BT_4179
Type: CAZyme
Location: 63808 - 65433 (+)

Gene ID: BT_4180
Type: CAZyme
Location: 65481 - 66284 (+)

Gene ID: BT_4181
Type: CAZyme
Location: 66937 - 69906 (-)

Gene ID: BT_4182
Type: TF
Location: 69994 - 74289 (-)

Gene ID: BT_4183
Type: CAZyme
Location: 74634 - 75947 (+)

Taxonomic Lineage

Domain

Bacteria

→

Phylum

Bacteroidota

→

Class

Bacteroidia

→

Order

Bacteroidales

→

Family

Bacteroidaceae

→

Genus

Bacteroides

→

Species

Bacteroides thetaiotaomicron

Gene Composition

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