Cluster: PUL0563
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate: arabinogalactan
- Genome ID: PUL0563
- CGC Family ID: CGCFAM_04144
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | AE015928 | BT_3674 | 1 | 2007 | - | GH127 |
| CAZyme | AE015928 | BT_3675 | 2045 | 3046 | - | GH43_34 |
| pfam | AE015928 | BT_3676 | 3258 | 5018 | + | BNR_4 |
| CAZyme | AE015928 | BT_3677 | 5015 | 7036 | + | GH154 |
| TF | AE015928 | BT_3678 | 7270 | 11415 | + | HTH_AraC |
| pfam | AE015928 | BT_3679 | 12054 | 13346 | + | TIG |
| TC | AE015928 | BT_3680 | 13367 | 16468 | + | 1.B.14.6.1 |
| pfam | AE015928 | BT_3681 | 16523 | 18496 | + | SusD_RagB | SusD-like_3 |
| pfam | AE015928 | BT_3682 | 18518 | 19405 | + | BT_3987-like_N | BT_3044-like_C | DUF4973 |
| CAZyme | AE015928 | BT_3683 | 19698 | 21593 | + | GH16_3 | GH43_24 |
| NULL(UNKNOWN) | AE015928 | BT_3684 | 21559 | 21789 | - | NULL(UNKNOWN) |
| CAZyme | AE015928 | BT_3685 | 21847 | 22914 | + | GH43_24 |
| CAZyme | AE015928 | BT_3686 | 22918 | 24213 | + | PL42 |
| CAZyme | AE015928 | BT_3687 | 24218 | 25363 | + | GH105 |
| pfam | AE015928 | BT_3688 | 25346 | 25363 | - | Acetyltransf_1 | Acetyltransf_9 |
Gene ID: BT_3674
Type: CAZyme
Location: 1 - 2007 (-)
Type: CAZyme
Location: 1 - 2007 (-)
Gene ID: BT_3675
Type: CAZyme
Location: 2045 - 3046 (-)
Type: CAZyme
Location: 2045 - 3046 (-)
Gene ID: BT_3676
Type: pfam
Location: 3258 - 5018 (+)
Type: pfam
Location: 3258 - 5018 (+)
Gene ID: BT_3677
Type: CAZyme
Location: 5015 - 7036 (+)
Type: CAZyme
Location: 5015 - 7036 (+)
Gene ID: BT_3678
Type: TF
Location: 7270 - 11415 (+)
Type: TF
Location: 7270 - 11415 (+)
Gene ID: BT_3679
Type: pfam
Location: 12054 - 13346 (+)
Type: pfam
Location: 12054 - 13346 (+)
Gene ID: BT_3680
Type: TC
Location: 13367 - 16468 (+)
Type: TC
Location: 13367 - 16468 (+)
Gene ID: BT_3681
Type: pfam
Location: 16523 - 18496 (+)
Type: pfam
Location: 16523 - 18496 (+)
Gene ID: BT_3682
Type: pfam
Location: 18518 - 19405 (+)
Type: pfam
Location: 18518 - 19405 (+)
Gene ID: BT_3683
Type: CAZyme
Location: 19698 - 21593 (+)
Type: CAZyme
Location: 19698 - 21593 (+)
Gene ID: BT_3684
Type: null
Location: 21559 - 21789 (-)
Type: null
Location: 21559 - 21789 (-)
Gene ID: BT_3685
Type: CAZyme
Location: 21847 - 22914 (+)
Type: CAZyme
Location: 21847 - 22914 (+)
Gene ID: BT_3686
Type: CAZyme
Location: 22918 - 24213 (+)
Type: CAZyme
Location: 22918 - 24213 (+)
Gene ID: BT_3687
Type: CAZyme
Location: 24218 - 25363 (+)
Type: CAZyme
Location: 24218 - 25363 (+)
Gene ID: BT_3688
Type: pfam
Location: 25346 - 25363 (-)
Type: pfam
Location: 25346 - 25363 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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