dbCAN HGM

Cluster: PUL0560

Cluster Details
Gene Composition
Taxonomic Lineage
Gene Composition

🧬 Cluster Details

Gene Count: 30
CAZyme Count: 4
Substrate: arabinogalactan
Genome ID: PUL0560
CGC Family ID: CGCFAM_06462
Continent: NA
Source Study: dbCAN-PUL Database →

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
NULL(UNKNOWN)	AE015928	BT_0262	1	636	+	NULL(UNKNOWN)
CAZyme	AE015928	BT_0263	732	2144	+	PL27
CAZyme	AE015928	BT_0264	2270	4018	-	GH43_24
CAZyme	AE015928	BT_0265	4060	5541	-	GH43_24
NULL(UNKNOWN)	AE015928	BT_0266	5554	7014	-	NULL(UNKNOWN)
TF	AE015928	BT_0267	7297	11409	+	HTH_AraC \| HTH_AraC
pfam	AE015928	BT_0268	11684	14617	+	Plug
pfam	AE015928	BT_0269	14651	16189	+	SusD_RagB \| SusD-like_3
NULL(UNKNOWN)	AE015928	BT_0270	16203	16997	+	NULL(UNKNOWN)
pfam	AE015928	BT_0271	17140	18015	+	DUF5007
TC	AE015928	BT_0272	18039	21209	+	1.B.14.6.1
pfam	AE015928	BT_0273	21234	22745	+	SusD_RagB \| SusD-like_3
pfam	AE015928	BT_0274	22772	23494	+	Fasciclin
pfam	AE015928	BT_0275	23515	25200	+	DUF5008 \| DUF5124 \| DUF5122 \| DUF5122
pfam	AE015928	BT_0276	25241	27046	+	Laminin_G_3
peptidase	AE015928	BT_0277	27060	29177	+	M98.UNW
pfam	AE015928	BT_0278	29189	30961	+	Phosphodiest
NULL(UNKNOWN)	AE015928	BT_0279	31108	31860	+	NULL(UNKNOWN)
pfam	AE015928	BT_0280	31974	33191	+	Transposase_mut
pfam	AE015928	BT_0281	33441	34082	-	Bac_DNA_binding \| HU-HIG
pfam	AE015928	BT_0282	34384	35679	+	VapE-like_dom \| DUF3874
NULL(UNKNOWN)	AE015928	BT_0283	35695	35880	+	NULL(UNKNOWN)
NULL(UNKNOWN)	AE015928	BT_0284	35926	37377	+	NULL(UNKNOWN)
TC	AE015928	BT_0285	37607	39025	+	1.A.30.2.9
pfam	AE015928	BT_0286	39009	39455	+	ExbD
pfam	AE015928	BT_0287	39460	39885	+	ExbD
NULL(UNKNOWN)	AE015928	BT_0288	39860	41383	+	NULL(UNKNOWN)
pfam	AE015928	BT_0289	41641	44331	-	OMP_b-brl_3 \| OMP_b-brl_3
CAZyme	AE015928	BT_0290	44649	46988	+	GH35
pfam	AE015928	BT_0291	47191	48156	+	Phage_integrase \| Phage_int_SAM_5

Gene ID: BT_0262
Type: null
Location: 1 - 636 (+)

Gene ID: BT_0263
Type: CAZyme
Location: 732 - 2144 (+)

Gene ID: BT_0264
Type: CAZyme
Location: 2270 - 4018 (-)

Gene ID: BT_0265
Type: CAZyme
Location: 4060 - 5541 (-)

Gene ID: BT_0266
Type: null
Location: 5554 - 7014 (-)

Gene ID: BT_0267
Type: TF
Location: 7297 - 11409 (+)

Gene ID: BT_0268
Type: pfam
Location: 11684 - 14617 (+)

Gene ID: BT_0269
Type: pfam
Location: 14651 - 16189 (+)

Gene ID: BT_0270
Type: null
Location: 16203 - 16997 (+)

Gene ID: BT_0271
Type: pfam
Location: 17140 - 18015 (+)

Gene ID: BT_0272
Type: TC
Location: 18039 - 21209 (+)

Gene ID: BT_0273
Type: pfam
Location: 21234 - 22745 (+)

Gene ID: BT_0274
Type: pfam
Location: 22772 - 23494 (+)

Gene ID: BT_0275
Type: pfam
Location: 23515 - 25200 (+)

Gene ID: BT_0276
Type: pfam
Location: 25241 - 27046 (+)

Gene ID: BT_0277
Type: peptidase
Location: 27060 - 29177 (+)

Gene ID: BT_0278
Type: pfam
Location: 29189 - 30961 (+)

Gene ID: BT_0279
Type: null
Location: 31108 - 31860 (+)

Gene ID: BT_0280
Type: pfam
Location: 31974 - 33191 (+)

Gene ID: BT_0281
Type: pfam
Location: 33441 - 34082 (-)

Gene ID: BT_0282
Type: pfam
Location: 34384 - 35679 (+)

Gene ID: BT_0283
Type: null
Location: 35695 - 35880 (+)

Gene ID: BT_0284
Type: null
Location: 35926 - 37377 (+)

Gene ID: BT_0285
Type: TC
Location: 37607 - 39025 (+)

Gene ID: BT_0286
Type: pfam
Location: 39009 - 39455 (+)

Gene ID: BT_0287
Type: pfam
Location: 39460 - 39885 (+)

Gene ID: BT_0288
Type: null
Location: 39860 - 41383 (+)

Gene ID: BT_0289
Type: pfam
Location: 41641 - 44331 (-)

Gene ID: BT_0290
Type: CAZyme
Location: 44649 - 46988 (+)

Gene ID: BT_0291
Type: pfam
Location: 47191 - 48156 (+)

Taxonomic Lineage

Domain

Bacteria

→

Phylum

Bacteroidota

→

Class

Bacteroidia

→

Order

Bacteroidales

→

Family

Bacteroidaceae

→

Genus

Bacteroides

→

Species

Bacteroides thetaiotaomicron

Gene Composition

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