Cluster: PUL0559
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate: pectin
- Genome ID: PUL0559
- CGC Family ID: CGCFAM_01238
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | AE015928 | BT_3662 | 1 | 1386 | + | CBM32 | GH43_34 |
| CAZyme | AE015928 | BT_3663 | 1641 | 3002 | + | CBM91 | GH43_10 |
| CAZyme | AE015928 | BT_3664 | 3014 | 4930 | + | GH97 |
| CAZyme | AE015928 | BT_3665 | 5049 | 6692 | + | GH29 |
| pfam | AE015928 | BT_3666 | 6704 | 7093 | + | rhaM |
| TF | AE015928 | BT_3667 | 7170 | 8030 | - | HTH_AraC | HTH_AraC |
| pfam | AE015928 | BT_3668 | 8247 | 8981 | + | TIG |
| NULL(UNKNOWN) | AE015928 | BT_3669 | 9062 | 9652 | + | NULL(UNKNOWN) |
| TC | AE015928 | BT_3670 | 9652 | 12792 | + | 1.B.14.6.1 |
| pfam | AE015928 | BT_3671 | 12817 | 14892 | + | SusD_RagB | SusD-like_3 |
| pfam | AE015928 | BT_3672 | 14924 | 15883 | + | BT_3987-like_N | BT_3044-like_C | DUF4973 |
| pfam | AE015928 | BT_3673 | 15999 | 16850 | + | TonB_C | DUF4488 | DUF4488 |
Gene ID: BT_3662
Type: CAZyme
Location: 1 - 1386 (+)
Type: CAZyme
Location: 1 - 1386 (+)
Gene ID: BT_3663
Type: CAZyme
Location: 1641 - 3002 (+)
Type: CAZyme
Location: 1641 - 3002 (+)
Gene ID: BT_3664
Type: CAZyme
Location: 3014 - 4930 (+)
Type: CAZyme
Location: 3014 - 4930 (+)
Gene ID: BT_3665
Type: CAZyme
Location: 5049 - 6692 (+)
Type: CAZyme
Location: 5049 - 6692 (+)
Gene ID: BT_3666
Type: pfam
Location: 6704 - 7093 (+)
Type: pfam
Location: 6704 - 7093 (+)
Gene ID: BT_3667
Type: TF
Location: 7170 - 8030 (-)
Type: TF
Location: 7170 - 8030 (-)
Gene ID: BT_3668
Type: pfam
Location: 8247 - 8981 (+)
Type: pfam
Location: 8247 - 8981 (+)
Gene ID: BT_3669
Type: null
Location: 9062 - 9652 (+)
Type: null
Location: 9062 - 9652 (+)
Gene ID: BT_3670
Type: TC
Location: 9652 - 12792 (+)
Type: TC
Location: 9652 - 12792 (+)
Gene ID: BT_3671
Type: pfam
Location: 12817 - 14892 (+)
Type: pfam
Location: 12817 - 14892 (+)
Gene ID: BT_3672
Type: pfam
Location: 14924 - 15883 (+)
Type: pfam
Location: 14924 - 15883 (+)
Gene ID: BT_3673
Type: pfam
Location: 15999 - 16850 (+)
Type: pfam
Location: 15999 - 16850 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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