Cluster: PUL0558
🧬 Cluster Details
- Gene Count: 50
- CAZyme Count: 21
- Substrate: pectin
- Genome ID: PUL0558
- CGC Family ID: CGCFAM_00212
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | AE015928 | BT_0981 | 1 | 4419 | - | HTH_AraC |
| NULL(UNKNOWN) | AE015928 | BT_0982 | 4677 | 4928 | - | NULL(UNKNOWN) |
| CAZyme | AE015928 | BT_0983 | 5158 | 7806 | - | GH2 |
| CAZyme | AE015928 | BT_0984 | 7835 | 10246 | - | GH139 |
| CAZyme | AE015928 | BT_0985 | 10256 | 11689 | - | CE20 |
| CAZyme | AE015928 | BT_0986 | 11692 | 15009 | - | GH106 |
| pfam | AE015928 | BT_0987 | 15133 | 16647 | - | AhpC-TSA | Redoxin | Thioredoxin_8 |
| TC | AE015928 | BT_0988 | 16811 | 19462 | - | 3.A.3.4.1 |
| STP | AE015928 | BT_0989 | 19583 | 20950 | - | HATPase_c | HisKA |
| TF | AE015928 | BT_0990 | 20947 | 21633 | - | Trans_reg_C |
| pfam | AE015928 | BT_0991 | 21696 | 22172 | + | ACT_3 | ACT_7 |
| CAZyme | AE015928 | BT_0992 | 22194 | 25046 | - | GH2 |
| CAZyme | AE015928 | BT_0993 | 25098 | 28376 | - | GH2 |
| STP | AE015928 | BT_0994 | 28732 | 30231 | + | HATPase_c | HisKA |
| TF | AE015928 | BT_0995 | 30228 | 31073 | - | HTH_AraC |
| CAZyme | AE015928 | BT_0996 | 31287 | 35543 | - | CBM57 | CBM97 | GH137 | GH2 |
| CAZyme | AE015928 | BT_0997 | 35656 | 38277 | - | GH138 |
| TC | AE015928 | BT_0998 | 38575 | 41007 | + | 2.A.21.9.2 |
| pfam | AE015928 | BT_0999 | 41047 | 41592 | + | Acetyltransf_1 | Acetyltransf_3 |
| pfam | AE015928 | BT_1000 | 42075 | 44483 | - | FtsX | FtsX |
| CAZyme | AE015928 | BT_1001 | 44689 | 46878 | - | GH78 |
| CAZyme | AE015928 | BT_1002 | 46899 | 48758 | - | GH141 |
| CAZyme | AE015928 | BT_1003 | 48778 | 50874 | - | GH127 |
| pfam | AE015928 | BT_1004 | 51010 | 51783 | - | DUF5131 |
| NULL(UNKNOWN) | AE015928 | BT_1005 | 52197 | 52454 | + | NULL(UNKNOWN) |
| STP | AE015928 | BT_1006 | 52481 | 53209 | - | Nitroreductase |
| pfam | AE015928 | BT_1007 | 53443 | 54234 | - | DUF2807 | DUF2807 | DUF4097 |
| peptidase | AE015928 | BT_1008 | 54301 | 55089 | - | S09.UPW |
| pfam | AE015928 | BT_1009 | 55095 | 56033 | - | DHO_dh |
| CAZyme | AE015928 | BT_1010 | 56316 | 58790 | + | GH95 |
| CAZyme | AE015928 | BT_1011 | 58804 | 60006 | + | GH105 |
| CAZyme | AE015928 | BT_1012 | 60043 | 61494 | + | GH140 |
| CAZyme | AE015928 | BT_1013 | 61487 | 65359 | + | CBM67 | GH33 | GH78 |
| pfam | AE015928 | BT_1014 | 65438 | 66958 | - | Mfa_like_1 |
| sulfatase | AE015928 | BT_1015 | 67510 | 68397 | + | S1_6 |
| pfam | AE015928 | BT_1016 | 68385 | 69167 | - | Patatin |
| CAZyme | AE015928 | BT_1017 | 69338 | 71299 | - | CE19 |
| CAZyme | AE015928 | BT_1018 | 71337 | 72674 | - | GH28 |
| CAZyme | AE015928 | BT_1019 | 72711 | 75482 | - | CBM67 | GH78 |
| CAZyme | AE015928 | BT_1020 | 75605 | 78934 | - | GH142 | GH143 |
| CAZyme | AE015928 | BT_1021 | 78986 | 79837 | - | GH43_18 |
| pfam | AE015928 | BT_1022 | 80159 | 80827 | - | DUF3826 |
| CAZyme | AE015928 | BT_1023 | 80901 | 82640 | - | PL1_2 |
| pfam | AE015928 | BT_1024 | 82867 | 85164 | - | SusD_RagB | SusD-like_3 |
| TC | AE015928 | BT_1025 | 85151 | 88459 | - | 1.B.14.6.1 |
| pfam | AE015928 | BT_1026 | 88492 | 89937 | - | DUF4957 | DUF4992 | DUF5123 |
| NULL(UNKNOWN) | AE015928 | BT_1027 | 90030 | 90215 | - | NULL(UNKNOWN) |
| pfam | AE015928 | BT_1028 | 90586 | 92760 | - | SusD_RagB | SusD-like_3 |
| TC | AE015928 | BT_1029 | 92814 | 96122 | - | 1.B.14.6.2 |
| pfam | AE015928 | BT_1030 | 96152 | 97627 | - | DUF4957 | DUF4992 | DUF5123 |
Gene ID: BT_0981
Type: TF
Location: 1 - 4419 (-)
Type: TF
Location: 1 - 4419 (-)
Gene ID: BT_0982
Type: null
Location: 4677 - 4928 (-)
Type: null
Location: 4677 - 4928 (-)
Gene ID: BT_0983
Type: CAZyme
Location: 5158 - 7806 (-)
Type: CAZyme
Location: 5158 - 7806 (-)
Gene ID: BT_0984
Type: CAZyme
Location: 7835 - 10246 (-)
Type: CAZyme
Location: 7835 - 10246 (-)
Gene ID: BT_0985
Type: CAZyme
Location: 10256 - 11689 (-)
Type: CAZyme
Location: 10256 - 11689 (-)
Gene ID: BT_0986
Type: CAZyme
Location: 11692 - 15009 (-)
Type: CAZyme
Location: 11692 - 15009 (-)
Gene ID: BT_0987
Type: pfam
Location: 15133 - 16647 (-)
Type: pfam
Location: 15133 - 16647 (-)
Gene ID: BT_0988
Type: TC
Location: 16811 - 19462 (-)
Type: TC
Location: 16811 - 19462 (-)
Gene ID: BT_0989
Type: STP
Location: 19583 - 20950 (-)
Type: STP
Location: 19583 - 20950 (-)
Gene ID: BT_0990
Type: TF
Location: 20947 - 21633 (-)
Type: TF
Location: 20947 - 21633 (-)
Gene ID: BT_0991
Type: pfam
Location: 21696 - 22172 (+)
Type: pfam
Location: 21696 - 22172 (+)
Gene ID: BT_0992
Type: CAZyme
Location: 22194 - 25046 (-)
Type: CAZyme
Location: 22194 - 25046 (-)
Gene ID: BT_0993
Type: CAZyme
Location: 25098 - 28376 (-)
Type: CAZyme
Location: 25098 - 28376 (-)
Gene ID: BT_0994
Type: STP
Location: 28732 - 30231 (+)
Type: STP
Location: 28732 - 30231 (+)
Gene ID: BT_0995
Type: TF
Location: 30228 - 31073 (-)
Type: TF
Location: 30228 - 31073 (-)
Gene ID: BT_0996
Type: CAZyme
Location: 31287 - 35543 (-)
Type: CAZyme
Location: 31287 - 35543 (-)
Gene ID: BT_0997
Type: CAZyme
Location: 35656 - 38277 (-)
Type: CAZyme
Location: 35656 - 38277 (-)
Gene ID: BT_0998
Type: TC
Location: 38575 - 41007 (+)
Type: TC
Location: 38575 - 41007 (+)
Gene ID: BT_0999
Type: pfam
Location: 41047 - 41592 (+)
Type: pfam
Location: 41047 - 41592 (+)
Gene ID: BT_1000
Type: pfam
Location: 42075 - 44483 (-)
Type: pfam
Location: 42075 - 44483 (-)
Gene ID: BT_1001
Type: CAZyme
Location: 44689 - 46878 (-)
Type: CAZyme
Location: 44689 - 46878 (-)
Gene ID: BT_1002
Type: CAZyme
Location: 46899 - 48758 (-)
Type: CAZyme
Location: 46899 - 48758 (-)
Gene ID: BT_1003
Type: CAZyme
Location: 48778 - 50874 (-)
Type: CAZyme
Location: 48778 - 50874 (-)
Gene ID: BT_1004
Type: pfam
Location: 51010 - 51783 (-)
Type: pfam
Location: 51010 - 51783 (-)
Gene ID: BT_1005
Type: null
Location: 52197 - 52454 (+)
Type: null
Location: 52197 - 52454 (+)
Gene ID: BT_1006
Type: STP
Location: 52481 - 53209 (-)
Type: STP
Location: 52481 - 53209 (-)
Gene ID: BT_1007
Type: pfam
Location: 53443 - 54234 (-)
Type: pfam
Location: 53443 - 54234 (-)
Gene ID: BT_1008
Type: peptidase
Location: 54301 - 55089 (-)
Type: peptidase
Location: 54301 - 55089 (-)
Gene ID: BT_1009
Type: pfam
Location: 55095 - 56033 (-)
Type: pfam
Location: 55095 - 56033 (-)
Gene ID: BT_1010
Type: CAZyme
Location: 56316 - 58790 (+)
Type: CAZyme
Location: 56316 - 58790 (+)
Gene ID: BT_1011
Type: CAZyme
Location: 58804 - 60006 (+)
Type: CAZyme
Location: 58804 - 60006 (+)
Gene ID: BT_1012
Type: CAZyme
Location: 60043 - 61494 (+)
Type: CAZyme
Location: 60043 - 61494 (+)
Gene ID: BT_1013
Type: CAZyme
Location: 61487 - 65359 (+)
Type: CAZyme
Location: 61487 - 65359 (+)
Gene ID: BT_1014
Type: pfam
Location: 65438 - 66958 (-)
Type: pfam
Location: 65438 - 66958 (-)
Gene ID: BT_1015
Type: sulfatase
Location: 67510 - 68397 (+)
Type: sulfatase
Location: 67510 - 68397 (+)
Gene ID: BT_1016
Type: pfam
Location: 68385 - 69167 (-)
Type: pfam
Location: 68385 - 69167 (-)
Gene ID: BT_1017
Type: CAZyme
Location: 69338 - 71299 (-)
Type: CAZyme
Location: 69338 - 71299 (-)
Gene ID: BT_1018
Type: CAZyme
Location: 71337 - 72674 (-)
Type: CAZyme
Location: 71337 - 72674 (-)
Gene ID: BT_1019
Type: CAZyme
Location: 72711 - 75482 (-)
Type: CAZyme
Location: 72711 - 75482 (-)
Gene ID: BT_1020
Type: CAZyme
Location: 75605 - 78934 (-)
Type: CAZyme
Location: 75605 - 78934 (-)
Gene ID: BT_1021
Type: CAZyme
Location: 78986 - 79837 (-)
Type: CAZyme
Location: 78986 - 79837 (-)
Gene ID: BT_1022
Type: pfam
Location: 80159 - 80827 (-)
Type: pfam
Location: 80159 - 80827 (-)
Gene ID: BT_1023
Type: CAZyme
Location: 80901 - 82640 (-)
Type: CAZyme
Location: 80901 - 82640 (-)
Gene ID: BT_1024
Type: pfam
Location: 82867 - 85164 (-)
Type: pfam
Location: 82867 - 85164 (-)
Gene ID: BT_1025
Type: TC
Location: 85151 - 88459 (-)
Type: TC
Location: 85151 - 88459 (-)
Gene ID: BT_1026
Type: pfam
Location: 88492 - 89937 (-)
Type: pfam
Location: 88492 - 89937 (-)
Gene ID: BT_1027
Type: null
Location: 90030 - 90215 (-)
Type: null
Location: 90030 - 90215 (-)
Gene ID: BT_1028
Type: pfam
Location: 90586 - 92760 (-)
Type: pfam
Location: 90586 - 92760 (-)
Gene ID: BT_1029
Type: TC
Location: 92814 - 96122 (-)
Type: TC
Location: 92814 - 96122 (-)
Gene ID: BT_1030
Type: pfam
Location: 96152 - 97627 (-)
Type: pfam
Location: 96152 - 97627 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Composition
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