Cluster: PUL0556
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: PUL0556
- CGC Family ID: CGCFAM_00016
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_016776 | BF638R_RS06200 | 1 | 24 | + | GH97 |
| TF | NC_016776 | BF638R_RS06205 | 1 | 600 | - | GerE |
| STP | NC_016776 | BF638R_RS06210 | 766 | 1776 | + | FecR |
| TC | NC_016776 | BF638R_RS06215 | 2087 | 5392 | + | 1.B.14.6.13 |
| TC | NC_016776 | BF638R_RS06220 | 5405 | 6949 | + | 8.A.46.2.1 |
| CAZyme | NC_016776 | BF638R_RS06225 | 6977 | 8029 | + | GH18 |
| pfam | NC_016776 | BF638R_RS06230 | 8047 | 9183 | + | BT_3987-like_N | Laminin_G_3 |
| pfam | NC_016776 | BF638R_RS06235 | 9206 | 10219 | + | F5_F8_type_C | BT_3987-like_N |
Gene ID: BF638R_RS06200
Type: CAZyme
Location: 1 - 24 (+)
Type: CAZyme
Location: 1 - 24 (+)
Gene ID: BF638R_RS06205
Type: TF
Location: 1 - 600 (-)
Type: TF
Location: 1 - 600 (-)
Gene ID: BF638R_RS06210
Type: STP
Location: 766 - 1776 (+)
Type: STP
Location: 766 - 1776 (+)
Gene ID: BF638R_RS06215
Type: TC
Location: 2087 - 5392 (+)
Type: TC
Location: 2087 - 5392 (+)
Gene ID: BF638R_RS06220
Type: TC
Location: 5405 - 6949 (+)
Type: TC
Location: 5405 - 6949 (+)
Gene ID: BF638R_RS06225
Type: CAZyme
Location: 6977 - 8029 (+)
Type: CAZyme
Location: 6977 - 8029 (+)
Gene ID: BF638R_RS06230
Type: pfam
Location: 8047 - 9183 (+)
Type: pfam
Location: 8047 - 9183 (+)
Gene ID: BF638R_RS06235
Type: pfam
Location: 9206 - 10219 (+)
Type: pfam
Location: 9206 - 10219 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Composition
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