Cluster: PUL0554_Rep_476_C6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: Rep_476
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0554_Rep_476_C6 | Rep_476_c_12_1 | 44 | 2197 | - | GH97 |
| CAZyme | PUL0554_Rep_476_C6 | Rep_476_c_12_2 | 2219 | 4717 | - | GH31 |
| pfam | PUL0554_Rep_476_C6 | Rep_476_c_12_4 | 6571 | 8067 | - | SusE | SusF_SusE | SusF_SusE |
| TC | PUL0554_Rep_476_C6 | Rep_476_c_12_5 | 8087 | 9592 | - | 8.A.46.1.5 |
| TC | PUL0554_Rep_476_C6 | Rep_476_c_12_6 | 9592 | 12594 | - | 1.B.14.6.1 |
Gene ID: Rep_476_c_12_1
Type: CAZyme
Location: 44 - 2197 (-)
Type: CAZyme
Location: 44 - 2197 (-)
Gene ID: Rep_476_c_12_2
Type: CAZyme
Location: 2219 - 4717 (-)
Type: CAZyme
Location: 2219 - 4717 (-)
Gene ID: Rep_476_c_12_4
Type: pfam
Location: 6571 - 8067 (-)
Type: pfam
Location: 6571 - 8067 (-)
Gene ID: Rep_476_c_12_5
Type: TC
Location: 8087 - 9592 (-)
Type: TC
Location: 8087 - 9592 (-)
Gene ID: Rep_476_c_12_6
Type: TC
Location: 9592 - 12594 (-)
Type: TC
Location: 9592 - 12594 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides rodentium
Gene Composition
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