Cluster: PUL0553_A43.bin_3_C0
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 13
- Substrate: xylan
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_00238
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1156 | 1473660 | 1475822 | + | GH115 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1158 | 1476904 | 1479339 | + | GH95 |
| TF | PUL0553_A43.bin_3_C0 | A43_contig_103_1159 | 1479498 | 1483517 | + | HTH_AraC |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1160 | 1483539 | 1484924 | - | CBM6 | GH43_29 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1161 | 1484932 | 1486857 | - | CE1 | CE6 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1162 | 1486880 | 1488838 | - | GH5_21 |
| NULL(UNKNOWN) | PUL0553_A43.bin_3_C0 | A43_contig_103_1163 | 1488883 | 1489620 | - | NULL(UNKNOWN) |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1164 | 1489700 | 1491940 | - | GH10 |
| pfam | PUL0553_A43.bin_3_C0 | A43_contig_103_1165 | 1491995 | 1493068 | - | BT_3987-like_N | DUF5627 |
| pfam | PUL0553_A43.bin_3_C0 | A43_contig_103_1166 | 1493107 | 1494864 | - | SusD_RagB | SusD-like_3 |
| peptidase | PUL0553_A43.bin_3_C0 | A43_contig_103_1167 | 1494909 | 1497719 | - | I39.UPW |
| pfam | PUL0553_A43.bin_3_C0 | A43_contig_103_1168 | 1497751 | 1499652 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0553_A43.bin_3_C0 | A43_contig_103_1169 | 1499667 | 1502810 | - | 1.B.14.6.1 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1170 | 1502930 | 1504663 | - | CBM91 | GH43_12 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1171 | 1504880 | 1506211 | - | CBM6 | GH43_29 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1172 | 1506231 | 1508174 | - | GH97 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1173 | 1508228 | 1510672 | - | GH31_4 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1174 | 1510698 | 1512425 | - | CBM91 | GH43_12 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1175 | 1512858 | 1515131 | - | GH3 |
| CAZyme | PUL0553_A43.bin_3_C0 | A43_contig_103_1177 | 1515539 | 1517137 | - | CBM91 | GH43_10 |
Gene ID: A43_contig_103_1156
Type: CAZyme
Location: 1473660 - 1475822 (+)
Type: CAZyme
Location: 1473660 - 1475822 (+)
Gene ID: A43_contig_103_1158
Type: CAZyme
Location: 1476904 - 1479339 (+)
Type: CAZyme
Location: 1476904 - 1479339 (+)
Gene ID: A43_contig_103_1159
Type: TF
Location: 1479498 - 1483517 (+)
Type: TF
Location: 1479498 - 1483517 (+)
Gene ID: A43_contig_103_1160
Type: CAZyme
Location: 1483539 - 1484924 (-)
Type: CAZyme
Location: 1483539 - 1484924 (-)
Gene ID: A43_contig_103_1161
Type: CAZyme
Location: 1484932 - 1486857 (-)
Type: CAZyme
Location: 1484932 - 1486857 (-)
Gene ID: A43_contig_103_1162
Type: CAZyme
Location: 1486880 - 1488838 (-)
Type: CAZyme
Location: 1486880 - 1488838 (-)
Gene ID: A43_contig_103_1163
Type: null
Location: 1488883 - 1489620 (-)
Type: null
Location: 1488883 - 1489620 (-)
Gene ID: A43_contig_103_1164
Type: CAZyme
Location: 1489700 - 1491940 (-)
Type: CAZyme
Location: 1489700 - 1491940 (-)
Gene ID: A43_contig_103_1165
Type: pfam
Location: 1491995 - 1493068 (-)
Type: pfam
Location: 1491995 - 1493068 (-)
Gene ID: A43_contig_103_1166
Type: pfam
Location: 1493107 - 1494864 (-)
Type: pfam
Location: 1493107 - 1494864 (-)
Gene ID: A43_contig_103_1167
Type: peptidase
Location: 1494909 - 1497719 (-)
Type: peptidase
Location: 1494909 - 1497719 (-)
Gene ID: A43_contig_103_1168
Type: pfam
Location: 1497751 - 1499652 (-)
Type: pfam
Location: 1497751 - 1499652 (-)
Gene ID: A43_contig_103_1169
Type: TC
Location: 1499667 - 1502810 (-)
Type: TC
Location: 1499667 - 1502810 (-)
Gene ID: A43_contig_103_1170
Type: CAZyme
Location: 1502930 - 1504663 (-)
Type: CAZyme
Location: 1502930 - 1504663 (-)
Gene ID: A43_contig_103_1171
Type: CAZyme
Location: 1504880 - 1506211 (-)
Type: CAZyme
Location: 1504880 - 1506211 (-)
Gene ID: A43_contig_103_1172
Type: CAZyme
Location: 1506231 - 1508174 (-)
Type: CAZyme
Location: 1506231 - 1508174 (-)
Gene ID: A43_contig_103_1173
Type: CAZyme
Location: 1508228 - 1510672 (-)
Type: CAZyme
Location: 1508228 - 1510672 (-)
Gene ID: A43_contig_103_1174
Type: CAZyme
Location: 1510698 - 1512425 (-)
Type: CAZyme
Location: 1510698 - 1512425 (-)
Gene ID: A43_contig_103_1175
Type: CAZyme
Location: 1512858 - 1515131 (-)
Type: CAZyme
Location: 1512858 - 1515131 (-)
Gene ID: A43_contig_103_1177
Type: CAZyme
Location: 1515539 - 1517137 (-)
Type: CAZyme
Location: 1515539 - 1517137 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Composition
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