Cluster: PUL0553
🧬 Cluster Details
- Gene Count: 22
- CAZyme Count: 13
- Substrate: xylan
- Genome ID: PUL0553
- CGC Family ID: CGCFAM_00238
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | FP929033 | BXY_29170 | 1 | 1605 | + | CBM91 | GH43_10 |
| CAZyme | FP929033 | BXY_29180 | 1702 | 4287 | + | GH3 |
| NULL(UNKNOWN) | FP929033 | BXY_29190 | 4488 | 4649 | + | NULL(UNKNOWN) |
| CAZyme | FP929033 | BXY_29200 | 4780 | 6447 | + | CBM91 | GH43_12 |
| CAZyme | FP929033 | BXY_29210 | 6473 | 8917 | + | GH31_4 |
| CAZyme | FP929033 | BXY_29220 | 8939 | 10915 | + | GH97 |
| CAZyme | FP929033 | BXY_29230 | 10935 | 12266 | + | CBM6 | GH43_29 |
| CAZyme | FP929033 | BXY_29240 | 12555 | 13913 | + | CBM91 | GH43_12 |
| TC | FP929033 | BXY_29250 | 14034 | 17177 | + | 1.B.14.6.1 |
| pfam | FP929033 | BXY_29260 | 17192 | 19093 | + | SusD_RagB | SusD-like_3 |
| peptidase | FP929033 | BXY_29270 | 19125 | 21935 | + | I39.UPW |
| pfam | FP929033 | BXY_29280 | 21980 | 23737 | + | SusD_RagB | SusD-like_3 |
| pfam | FP929033 | BXY_29290 | 23776 | 24849 | + | BT_3987-like_N | DUF5627 |
| CAZyme | FP929033 | BXY_29300 | 24880 | 27144 | + | GH10 |
| NULL(UNKNOWN) | FP929033 | BXY_29310 | 27224 | 27961 | + | NULL(UNKNOWN) |
| CAZyme | FP929033 | BXY_29320 | 28006 | 29964 | + | GH5_21 |
| CAZyme | FP929033 | BXY_29330 | 30089 | 31912 | + | CE1 | CE6 |
| CAZyme | FP929033 | BXY_29340 | 31920 | 33305 | + | CBM6 | GH43_29 |
| TF | FP929033 | BXY_29350 | 33327 | 37346 | - | HTH_AraC | HTH_AraC |
| CAZyme | FP929033 | BXY_29360 | 37505 | 39940 | - | GH95 |
| CAZyme | FP929033 | BXY_29370 | 40650 | 43220 | - | GH115 |
| NULL(UNKNOWN) | FP929033 | BXY_29380 | 43213 | 43220 | - | NULL(UNKNOWN) |
Gene ID: BXY_29170
Type: CAZyme
Location: 1 - 1605 (+)
Type: CAZyme
Location: 1 - 1605 (+)
Gene ID: BXY_29180
Type: CAZyme
Location: 1702 - 4287 (+)
Type: CAZyme
Location: 1702 - 4287 (+)
Gene ID: BXY_29190
Type: null
Location: 4488 - 4649 (+)
Type: null
Location: 4488 - 4649 (+)
Gene ID: BXY_29200
Type: CAZyme
Location: 4780 - 6447 (+)
Type: CAZyme
Location: 4780 - 6447 (+)
Gene ID: BXY_29210
Type: CAZyme
Location: 6473 - 8917 (+)
Type: CAZyme
Location: 6473 - 8917 (+)
Gene ID: BXY_29220
Type: CAZyme
Location: 8939 - 10915 (+)
Type: CAZyme
Location: 8939 - 10915 (+)
Gene ID: BXY_29230
Type: CAZyme
Location: 10935 - 12266 (+)
Type: CAZyme
Location: 10935 - 12266 (+)
Gene ID: BXY_29240
Type: CAZyme
Location: 12555 - 13913 (+)
Type: CAZyme
Location: 12555 - 13913 (+)
Gene ID: BXY_29250
Type: TC
Location: 14034 - 17177 (+)
Type: TC
Location: 14034 - 17177 (+)
Gene ID: BXY_29260
Type: pfam
Location: 17192 - 19093 (+)
Type: pfam
Location: 17192 - 19093 (+)
Gene ID: BXY_29270
Type: peptidase
Location: 19125 - 21935 (+)
Type: peptidase
Location: 19125 - 21935 (+)
Gene ID: BXY_29280
Type: pfam
Location: 21980 - 23737 (+)
Type: pfam
Location: 21980 - 23737 (+)
Gene ID: BXY_29290
Type: pfam
Location: 23776 - 24849 (+)
Type: pfam
Location: 23776 - 24849 (+)
Gene ID: BXY_29300
Type: CAZyme
Location: 24880 - 27144 (+)
Type: CAZyme
Location: 24880 - 27144 (+)
Gene ID: BXY_29310
Type: null
Location: 27224 - 27961 (+)
Type: null
Location: 27224 - 27961 (+)
Gene ID: BXY_29320
Type: CAZyme
Location: 28006 - 29964 (+)
Type: CAZyme
Location: 28006 - 29964 (+)
Gene ID: BXY_29330
Type: CAZyme
Location: 30089 - 31912 (+)
Type: CAZyme
Location: 30089 - 31912 (+)
Gene ID: BXY_29340
Type: CAZyme
Location: 31920 - 33305 (+)
Type: CAZyme
Location: 31920 - 33305 (+)
Gene ID: BXY_29350
Type: TF
Location: 33327 - 37346 (-)
Type: TF
Location: 33327 - 37346 (-)
Gene ID: BXY_29360
Type: CAZyme
Location: 37505 - 39940 (-)
Type: CAZyme
Location: 37505 - 39940 (-)
Gene ID: BXY_29370
Type: CAZyme
Location: 40650 - 43220 (-)
Type: CAZyme
Location: 40650 - 43220 (-)
Gene ID: BXY_29380
Type: null
Location: 43213 - 43220 (-)
Type: null
Location: 43213 - 43220 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Composition
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