Cluster: PUL0548_Rep_460_C1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: Rep_460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0548_Rep_460_C1 | Rep_460_c_50_20 | 25860 | 27320 | - | GH28 |
| CAZyme | PUL0548_Rep_460_C1 | Rep_460_c_50_21 | 27327 | 29540 | - | GH92 |
| CAZyme | PUL0548_Rep_460_C1 | Rep_460_c_50_22 | 29546 | 31618 | - | GH92 |
| pfam | PUL0548_Rep_460_C1 | Rep_460_c_50_23 | 31695 | 33245 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0548_Rep_460_C1 | Rep_460_c_50_24 | 33270 | 36620 | - | 1.B.14.6.1 |
| STP | PUL0548_Rep_460_C1 | Rep_460_c_50_25 | 36764 | 37735 | - | FecR |
| TF | PUL0548_Rep_460_C1 | Rep_460_c_50_26 | 37814 | 38377 | - | GerE |
Gene ID: Rep_460_c_50_20
Type: CAZyme
Location: 25860 - 27320 (-)
Type: CAZyme
Location: 25860 - 27320 (-)
Gene ID: Rep_460_c_50_21
Type: CAZyme
Location: 27327 - 29540 (-)
Type: CAZyme
Location: 27327 - 29540 (-)
Gene ID: Rep_460_c_50_22
Type: CAZyme
Location: 29546 - 31618 (-)
Type: CAZyme
Location: 29546 - 31618 (-)
Gene ID: Rep_460_c_50_23
Type: pfam
Location: 31695 - 33245 (-)
Type: pfam
Location: 31695 - 33245 (-)
Gene ID: Rep_460_c_50_24
Type: TC
Location: 33270 - 36620 (-)
Type: TC
Location: 33270 - 36620 (-)
Gene ID: Rep_460_c_50_25
Type: STP
Location: 36764 - 37735 (-)
Type: STP
Location: 36764 - 37735 (-)
Gene ID: Rep_460_c_50_26
Type: TF
Location: 37814 - 38377 (-)
Type: TF
Location: 37814 - 38377 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercorirosoris
Gene Composition
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