Cluster: PUL0548_Rep_457_C0
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_00485
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0548_Rep_457_C0 | Rep_457_c_0_2482 | 3189748 | 3190311 | + | GerE |
| STP | PUL0548_Rep_457_C0 | Rep_457_c_0_2483 | 3190390 | 3191361 | + | FecR |
| TC | PUL0548_Rep_457_C0 | Rep_457_c_0_2484 | 3191502 | 3194849 | + | 1.B.14.6.1 |
| pfam | PUL0548_Rep_457_C0 | Rep_457_c_0_2485 | 3194874 | 3196424 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0548_Rep_457_C0 | Rep_457_c_0_2486 | 3196501 | 3198573 | + | GH92 | GH92 |
| CAZyme | PUL0548_Rep_457_C0 | Rep_457_c_0_2487 | 3198579 | 3200792 | + | GH92 |
| CAZyme | PUL0548_Rep_457_C0 | Rep_457_c_0_2488 | 3200795 | 3202255 | + | GH28 |
Gene ID: Rep_457_c_0_2482
Type: TF
Location: 3189748 - 3190311 (+)
Type: TF
Location: 3189748 - 3190311 (+)
Gene ID: Rep_457_c_0_2483
Type: STP
Location: 3190390 - 3191361 (+)
Type: STP
Location: 3190390 - 3191361 (+)
Gene ID: Rep_457_c_0_2484
Type: TC
Location: 3191502 - 3194849 (+)
Type: TC
Location: 3191502 - 3194849 (+)
Gene ID: Rep_457_c_0_2485
Type: pfam
Location: 3194874 - 3196424 (+)
Type: pfam
Location: 3194874 - 3196424 (+)
Gene ID: Rep_457_c_0_2486
Type: CAZyme
Location: 3196501 - 3198573 (+)
Type: CAZyme
Location: 3196501 - 3198573 (+)
Gene ID: Rep_457_c_0_2487
Type: CAZyme
Location: 3198579 - 3200792 (+)
Type: CAZyme
Location: 3198579 - 3200792 (+)
Gene ID: Rep_457_c_0_2488
Type: CAZyme
Location: 3200795 - 3202255 (+)
Type: CAZyme
Location: 3200795 - 3202255 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Composition
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