Cluster: PUL0542
🧬 Cluster Details
- Gene Count: 30
- CAZyme Count: 7
- Substrate: xylan
- Genome ID: PUL0542
- CGC Family ID: CGCFAM_04134
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DQ868502.2 | ABI49930.1 | 238 | 1965 | + | 8.A.59.2.1 |
| TF | DQ868502.2 | ABI49931.1 | 1958 | 2737 | + | HTH_AraC | HTH_AraC |
| STP | DQ868502.2 | ABI49932.1 | 2842 | 4167 | + | SBP_bac_1 |
| TC | DQ868502.2 | ABI49933.1 | 4230 | 5099 | + | 3.A.1.1.18 |
| TC | DQ868502.2 | ABI49934.1 | 5114 | 5980 | + | 3.A.1.1.41 |
| sulfatase | DQ868502.2 | ABI49935.1 | 6173 | 7141 | + | S1_4 |
| CAZyme | DQ868502.2 | ABI49936.1 | 7165 | 7779 | + | CE4 |
| CAZyme | DQ868502.2 | ABI49956.1 | 7859 | 9976 | + | GH52 |
| CAZyme | DQ868502.2 | ABI49937.2 | 9979 | 10974 | + | GH10 |
| pfam | DQ868502.2 | ABI49960.1 | 11739 | 13196 | + | DDE_Tnp_IS66 | zf-IS66 | DUF6444 |
| TC | DQ868502.2 | ABI49938.1 | 14709 | 15791 | + | 3.A.1.1.9 |
| TC | DQ868502.2 | ABI49939.1 | 15807 | 16697 | + | 3.A.1.1.9 |
| CAZyme | DQ868502.2 | ABI49940.1 | 16715 | 18754 | + | GH67 |
| CAZyme | DQ868502.2 | ABI49941.1 | 18770 | 20284 | + | GH39 |
| STP | DQ868502.2 | ABI49942.1 | 20316 | 21260 | + | PfkB |
| sulfatase | DQ868502.2 | ABI49943.1 | 21276 | 21926 | + | S1_27 |
| TF | DQ868502.2 | ABI49944.1 | 21991 | 22740 | + | GntR |
| pfam | DQ868502.2 | ABI49945.1 | 22777 | 24198 | + | UxaC |
| pfam | DQ868502.2 | ABI49946.1 | 24206 | 25321 | + | UxuA |
| pfam | DQ868502.2 | ABI49947.1 | 25297 | 26142 | + | adh_short | KR | adh_short_C2 |
| TC | DQ868502.2 | ABI49948.1 | 26219 | 26863 | + | 9.B.28.1.5 |
| pfam | DQ868502.2 | ABI49949.1 | 27135 | 27650 | + | DUF6431 |
| pfam | DQ868502.2 | ABI49958.1 | 27832 | 29085 | + | rve | Mu-transpos_C | HTH_32 | rve_3 | Mu-transpos_C_2 |
| STP | DQ868502.2 | ABI49950.1 | 29078 | 29878 | + | AAA |
| CAZyme | DQ868502.2 | ABI49951.1 | 30216 | 31454 | - | GH10 |
| pfam | DQ868502.2 | ABI49952.1 | 32071 | 32742 | + | DUF34_NIF3 |
| pfam | DQ868502.2 | ABI49953.1 | 32916 | 33575 | + | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | DQ868502.2 | ABI49959.1 | 33620 | 35227 | + | CBM91 | GH43_11 |
| pfam | DQ868502.2 | ABI49954.1 | 35336 | 36673 | + | AP_endonuc_2 |
| pfam | DQ868502.2 | ABI49955.1 | 36681 | 38189 | + | FGGY_N | FGGY_C |
Gene ID: ABI49930.1
Type: TC
Location: 238 - 1965 (+)
Type: TC
Location: 238 - 1965 (+)
Gene ID: ABI49931.1
Type: TF
Location: 1958 - 2737 (+)
Type: TF
Location: 1958 - 2737 (+)
Gene ID: ABI49932.1
Type: STP
Location: 2842 - 4167 (+)
Type: STP
Location: 2842 - 4167 (+)
Gene ID: ABI49933.1
Type: TC
Location: 4230 - 5099 (+)
Type: TC
Location: 4230 - 5099 (+)
Gene ID: ABI49934.1
Type: TC
Location: 5114 - 5980 (+)
Type: TC
Location: 5114 - 5980 (+)
Gene ID: ABI49935.1
Type: sulfatase
Location: 6173 - 7141 (+)
Type: sulfatase
Location: 6173 - 7141 (+)
Gene ID: ABI49936.1
Type: CAZyme
Location: 7165 - 7779 (+)
Type: CAZyme
Location: 7165 - 7779 (+)
Gene ID: ABI49956.1
Type: CAZyme
Location: 7859 - 9976 (+)
Type: CAZyme
Location: 7859 - 9976 (+)
Gene ID: ABI49937.2
Type: CAZyme
Location: 9979 - 10974 (+)
Type: CAZyme
Location: 9979 - 10974 (+)
Gene ID: ABI49960.1
Type: pfam
Location: 11739 - 13196 (+)
Type: pfam
Location: 11739 - 13196 (+)
Gene ID: ABI49938.1
Type: TC
Location: 14709 - 15791 (+)
Type: TC
Location: 14709 - 15791 (+)
Gene ID: ABI49939.1
Type: TC
Location: 15807 - 16697 (+)
Type: TC
Location: 15807 - 16697 (+)
Gene ID: ABI49940.1
Type: CAZyme
Location: 16715 - 18754 (+)
Type: CAZyme
Location: 16715 - 18754 (+)
Gene ID: ABI49941.1
Type: CAZyme
Location: 18770 - 20284 (+)
Type: CAZyme
Location: 18770 - 20284 (+)
Gene ID: ABI49942.1
Type: STP
Location: 20316 - 21260 (+)
Type: STP
Location: 20316 - 21260 (+)
Gene ID: ABI49943.1
Type: sulfatase
Location: 21276 - 21926 (+)
Type: sulfatase
Location: 21276 - 21926 (+)
Gene ID: ABI49944.1
Type: TF
Location: 21991 - 22740 (+)
Type: TF
Location: 21991 - 22740 (+)
Gene ID: ABI49945.1
Type: pfam
Location: 22777 - 24198 (+)
Type: pfam
Location: 22777 - 24198 (+)
Gene ID: ABI49946.1
Type: pfam
Location: 24206 - 25321 (+)
Type: pfam
Location: 24206 - 25321 (+)
Gene ID: ABI49947.1
Type: pfam
Location: 25297 - 26142 (+)
Type: pfam
Location: 25297 - 26142 (+)
Gene ID: ABI49948.1
Type: TC
Location: 26219 - 26863 (+)
Type: TC
Location: 26219 - 26863 (+)
Gene ID: ABI49949.1
Type: pfam
Location: 27135 - 27650 (+)
Type: pfam
Location: 27135 - 27650 (+)
Gene ID: ABI49958.1
Type: pfam
Location: 27832 - 29085 (+)
Type: pfam
Location: 27832 - 29085 (+)
Gene ID: ABI49950.1
Type: STP
Location: 29078 - 29878 (+)
Type: STP
Location: 29078 - 29878 (+)
Gene ID: ABI49951.1
Type: CAZyme
Location: 30216 - 31454 (-)
Type: CAZyme
Location: 30216 - 31454 (-)
Gene ID: ABI49952.1
Type: pfam
Location: 32071 - 32742 (+)
Type: pfam
Location: 32071 - 32742 (+)
Gene ID: ABI49953.1
Type: pfam
Location: 32916 - 33575 (+)
Type: pfam
Location: 32916 - 33575 (+)
Gene ID: ABI49959.1
Type: CAZyme
Location: 33620 - 35227 (+)
Type: CAZyme
Location: 33620 - 35227 (+)
Gene ID: ABI49954.1
Type: pfam
Location: 35336 - 36673 (+)
Type: pfam
Location: 35336 - 36673 (+)
Gene ID: ABI49955.1
Type: pfam
Location: 36681 - 38189 (+)
Type: pfam
Location: 36681 - 38189 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Bacillales
Family
Bacillaceae
Genus
Geobacillus
Species
Geobacillus stearothermophilus
Gene Composition
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