Cluster: PUL0539_Rep_460_C1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate: pectin
- Genome ID: Rep_460
- CGC Family ID: CGCFAM_00298
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0539_Rep_460_C1 | Rep_460_c_6_76 | 111248 | 112669 | - | GH28 |
| sulfatase | PUL0539_Rep_460_C1 | Rep_460_c_6_78 | 114269 | 116266 | - | S1_27 |
| TC | PUL0539_Rep_460_C1 | Rep_460_c_6_79 | 116281 | 119487 | - | 1.B.14.6.1 |
| TF | PUL0539_Rep_460_C1 | Rep_460_c_6_80 | 119761 | 120687 | - | HTH_AraC | HTH_AraC |
| CAZyme | PUL0539_Rep_460_C1 | Rep_460_c_6_81 | 120816 | 122114 | - | GH105 |
| pfam | PUL0539_Rep_460_C1 | Rep_460_c_6_82 | 122185 | 122994 | - | Aldolase_II |
| TC | PUL0539_Rep_460_C1 | Rep_460_c_6_83 | 123169 | 124200 | - | 2.A.7.6.1 |
| pfam | PUL0539_Rep_460_C1 | Rep_460_c_6_84 | 124446 | 125696 | - | RhaA |
| pfam | PUL0539_Rep_460_C1 | Rep_460_c_6_85 | 125761 | 127218 | - | FGGY_N | FGGY_C |
| CAZyme | PUL0539_Rep_460_C1 | Rep_460_c_6_86 | 127344 | 128882 | - | GH28 |
| CAZyme | PUL0539_Rep_460_C1 | Rep_460_c_6_87 | 128914 | 130749 | - | PL11 |
| CAZyme | PUL0539_Rep_460_C1 | Rep_460_c_6_88 | 130765 | 133563 | - | GH106 |
| CAZyme | PUL0539_Rep_460_C1 | Rep_460_c_6_89 | 133762 | 136293 | - | CE20 | GH105 |
Gene ID: Rep_460_c_6_76
Type: CAZyme
Location: 111248 - 112669 (-)
Type: CAZyme
Location: 111248 - 112669 (-)
Gene ID: Rep_460_c_6_78
Type: sulfatase
Location: 114269 - 116266 (-)
Type: sulfatase
Location: 114269 - 116266 (-)
Gene ID: Rep_460_c_6_79
Type: TC
Location: 116281 - 119487 (-)
Type: TC
Location: 116281 - 119487 (-)
Gene ID: Rep_460_c_6_80
Type: TF
Location: 119761 - 120687 (-)
Type: TF
Location: 119761 - 120687 (-)
Gene ID: Rep_460_c_6_81
Type: CAZyme
Location: 120816 - 122114 (-)
Type: CAZyme
Location: 120816 - 122114 (-)
Gene ID: Rep_460_c_6_82
Type: pfam
Location: 122185 - 122994 (-)
Type: pfam
Location: 122185 - 122994 (-)
Gene ID: Rep_460_c_6_83
Type: TC
Location: 123169 - 124200 (-)
Type: TC
Location: 123169 - 124200 (-)
Gene ID: Rep_460_c_6_84
Type: pfam
Location: 124446 - 125696 (-)
Type: pfam
Location: 124446 - 125696 (-)
Gene ID: Rep_460_c_6_85
Type: pfam
Location: 125761 - 127218 (-)
Type: pfam
Location: 125761 - 127218 (-)
Gene ID: Rep_460_c_6_86
Type: CAZyme
Location: 127344 - 128882 (-)
Type: CAZyme
Location: 127344 - 128882 (-)
Gene ID: Rep_460_c_6_87
Type: CAZyme
Location: 128914 - 130749 (-)
Type: CAZyme
Location: 128914 - 130749 (-)
Gene ID: Rep_460_c_6_88
Type: CAZyme
Location: 130765 - 133563 (-)
Type: CAZyme
Location: 130765 - 133563 (-)
Gene ID: Rep_460_c_6_89
Type: CAZyme
Location: 133762 - 136293 (-)
Type: CAZyme
Location: 133762 - 136293 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercorirosoris
Gene Composition
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