Cluster: PUL0539_Rep_457_C0
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate: pectin
- Genome ID: Rep_457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0539_Rep_457_C0 | Rep_457_c_0_3494 | 4649037 | 4651568 | + | CE20 | GH105 |
| CAZyme | PUL0539_Rep_457_C0 | Rep_457_c_0_3495 | 4651576 | 4654404 | + | GH106 |
| CAZyme | PUL0539_Rep_457_C0 | Rep_457_c_0_3496 | 4654554 | 4656383 | + | PL11 |
| CAZyme | PUL0539_Rep_457_C0 | Rep_457_c_0_3497 | 4656421 | 4657944 | + | GH28 |
| pfam | PUL0539_Rep_457_C0 | Rep_457_c_0_3498 | 4658064 | 4659521 | + | FGGY_N | FGGY_C |
| pfam | PUL0539_Rep_457_C0 | Rep_457_c_0_3499 | 4659588 | 4660841 | + | RhaA |
| TC | PUL0539_Rep_457_C0 | Rep_457_c_0_3500 | 4660941 | 4661972 | + | 2.A.7.6.1 |
| pfam | PUL0539_Rep_457_C0 | Rep_457_c_0_3501 | 4662074 | 4662883 | + | Aldolase_II |
| CAZyme | PUL0539_Rep_457_C0 | Rep_457_c_0_3502 | 4662908 | 4664206 | + | GH105 |
| TF | PUL0539_Rep_457_C0 | Rep_457_c_0_3503 | 4664340 | 4665260 | + | HTH_AraC | HTH_AraC |
| CAZyme | PUL0539_Rep_457_C0 | Rep_457_c_0_3504 | 4665495 | 4666916 | + | GH28 |
| sulfatase | PUL0539_Rep_457_C0 | Rep_457_c_0_3505 | 4666978 | 4668375 | + | S1_20 |
| TC | PUL0539_Rep_457_C0 | Rep_457_c_0_3506 | 4668708 | 4671914 | + | 1.B.14.6.1 |
| sulfatase | PUL0539_Rep_457_C0 | Rep_457_c_0_3507 | 4671923 | 4673926 | + | S1_27 |
| NULL(UNKNOWN) | PUL0539_Rep_457_C0 | Rep_457_c_0_3508 | 4673868 | 4674059 | - | NULL(UNKNOWN) |
| CAZyme | PUL0539_Rep_457_C0 | Rep_457_c_0_3509 | 4674065 | 4675441 | + | PL1_2 |
Gene ID: Rep_457_c_0_3494
Type: CAZyme
Location: 4649037 - 4651568 (+)
Type: CAZyme
Location: 4649037 - 4651568 (+)
Gene ID: Rep_457_c_0_3495
Type: CAZyme
Location: 4651576 - 4654404 (+)
Type: CAZyme
Location: 4651576 - 4654404 (+)
Gene ID: Rep_457_c_0_3496
Type: CAZyme
Location: 4654554 - 4656383 (+)
Type: CAZyme
Location: 4654554 - 4656383 (+)
Gene ID: Rep_457_c_0_3497
Type: CAZyme
Location: 4656421 - 4657944 (+)
Type: CAZyme
Location: 4656421 - 4657944 (+)
Gene ID: Rep_457_c_0_3498
Type: pfam
Location: 4658064 - 4659521 (+)
Type: pfam
Location: 4658064 - 4659521 (+)
Gene ID: Rep_457_c_0_3499
Type: pfam
Location: 4659588 - 4660841 (+)
Type: pfam
Location: 4659588 - 4660841 (+)
Gene ID: Rep_457_c_0_3500
Type: TC
Location: 4660941 - 4661972 (+)
Type: TC
Location: 4660941 - 4661972 (+)
Gene ID: Rep_457_c_0_3501
Type: pfam
Location: 4662074 - 4662883 (+)
Type: pfam
Location: 4662074 - 4662883 (+)
Gene ID: Rep_457_c_0_3502
Type: CAZyme
Location: 4662908 - 4664206 (+)
Type: CAZyme
Location: 4662908 - 4664206 (+)
Gene ID: Rep_457_c_0_3503
Type: TF
Location: 4664340 - 4665260 (+)
Type: TF
Location: 4664340 - 4665260 (+)
Gene ID: Rep_457_c_0_3504
Type: CAZyme
Location: 4665495 - 4666916 (+)
Type: CAZyme
Location: 4665495 - 4666916 (+)
Gene ID: Rep_457_c_0_3505
Type: sulfatase
Location: 4666978 - 4668375 (+)
Type: sulfatase
Location: 4666978 - 4668375 (+)
Gene ID: Rep_457_c_0_3506
Type: TC
Location: 4668708 - 4671914 (+)
Type: TC
Location: 4668708 - 4671914 (+)
Gene ID: Rep_457_c_0_3507
Type: sulfatase
Location: 4671923 - 4673926 (+)
Type: sulfatase
Location: 4671923 - 4673926 (+)
Gene ID: Rep_457_c_0_3508
Type: null
Location: 4673868 - 4674059 (-)
Type: null
Location: 4673868 - 4674059 (-)
Gene ID: Rep_457_c_0_3509
Type: CAZyme
Location: 4674065 - 4675441 (+)
Type: CAZyme
Location: 4674065 - 4675441 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Composition
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