Cluster: PUL0535_Rep_460_C2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: arabinogalactan
- Genome ID: Rep_460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0535_Rep_460_C2 | Rep_460_c_10_38 | 55401 | 59612 | + | HTH_AraC |
| TC | PUL0535_Rep_460_C2 | Rep_460_c_10_39 | 60312 | 63464 | + | 1.B.14.6.1 |
| pfam | PUL0535_Rep_460_C2 | Rep_460_c_10_40 | 63493 | 65418 | + | SusD_RagB | SusD-like_3 |
| TC | PUL0535_Rep_460_C2 | Rep_460_c_10_41 | 65454 | 68474 | + | 1.B.14.6.1 |
| pfam | PUL0535_Rep_460_C2 | Rep_460_c_10_42 | 68505 | 70172 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0535_Rep_460_C2 | Rep_460_c_10_43 | 70206 | 71105 | + | CBM32 |
| CAZyme | PUL0535_Rep_460_C2 | Rep_460_c_10_44 | 71125 | 72597 | + | GH16_3 |
| CAZyme | PUL0535_Rep_460_C2 | Rep_460_c_10_45 | 72686 | 74584 | + | GH16_3 | GH43_24 |
Gene ID: Rep_460_c_10_38
Type: TF
Location: 55401 - 59612 (+)
Type: TF
Location: 55401 - 59612 (+)
Gene ID: Rep_460_c_10_39
Type: TC
Location: 60312 - 63464 (+)
Type: TC
Location: 60312 - 63464 (+)
Gene ID: Rep_460_c_10_40
Type: pfam
Location: 63493 - 65418 (+)
Type: pfam
Location: 63493 - 65418 (+)
Gene ID: Rep_460_c_10_41
Type: TC
Location: 65454 - 68474 (+)
Type: TC
Location: 65454 - 68474 (+)
Gene ID: Rep_460_c_10_42
Type: pfam
Location: 68505 - 70172 (+)
Type: pfam
Location: 68505 - 70172 (+)
Gene ID: Rep_460_c_10_43
Type: CAZyme
Location: 70206 - 71105 (+)
Type: CAZyme
Location: 70206 - 71105 (+)
Gene ID: Rep_460_c_10_44
Type: CAZyme
Location: 71125 - 72597 (+)
Type: CAZyme
Location: 71125 - 72597 (+)
Gene ID: Rep_460_c_10_45
Type: CAZyme
Location: 72686 - 74584 (+)
Type: CAZyme
Location: 72686 - 74584 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercorirosoris
Gene Composition
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