Cluster: PUL0535_Rep_457_C1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: arabinogalactan
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_00646
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0535_Rep_457_C1 | Rep_457_c_0_3891 | 5202140 | 5206351 | + | HTH_AraC |
| NULL(UNKNOWN) | PUL0535_Rep_457_C1 | Rep_457_c_0_3892 | 5206694 | 5207251 | + | NULL(UNKNOWN) |
| TC | PUL0535_Rep_457_C1 | Rep_457_c_0_3893 | 5207309 | 5210443 | + | 1.B.14.6.1 |
| TC | PUL0535_Rep_457_C1 | Rep_457_c_0_3895 | 5212439 | 5215453 | + | 1.B.14.6.1 |
| pfam | PUL0535_Rep_457_C1 | Rep_457_c_0_3896 | 5215485 | 5217155 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0535_Rep_457_C1 | Rep_457_c_0_3898 | 5218102 | 5219568 | + | GH16_3 |
| CAZyme | PUL0535_Rep_457_C1 | Rep_457_c_0_3899 | 5219661 | 5221547 | + | GH16_3 | GH43_24 |
Gene ID: Rep_457_c_0_3891
Type: TF
Location: 5202140 - 5206351 (+)
Type: TF
Location: 5202140 - 5206351 (+)
Gene ID: Rep_457_c_0_3892
Type: null
Location: 5206694 - 5207251 (+)
Type: null
Location: 5206694 - 5207251 (+)
Gene ID: Rep_457_c_0_3893
Type: TC
Location: 5207309 - 5210443 (+)
Type: TC
Location: 5207309 - 5210443 (+)
Gene ID: Rep_457_c_0_3895
Type: TC
Location: 5212439 - 5215453 (+)
Type: TC
Location: 5212439 - 5215453 (+)
Gene ID: Rep_457_c_0_3896
Type: pfam
Location: 5215485 - 5217155 (+)
Type: pfam
Location: 5215485 - 5217155 (+)
Gene ID: Rep_457_c_0_3898
Type: CAZyme
Location: 5218102 - 5219568 (+)
Type: CAZyme
Location: 5218102 - 5219568 (+)
Gene ID: Rep_457_c_0_3899
Type: CAZyme
Location: 5219661 - 5221547 (+)
Type: CAZyme
Location: 5219661 - 5221547 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Composition
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