Cluster: PUL0529
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 13
- Substrate: pectin
- Genome ID: PUL0529
- CGC Family ID: CGCFAM_06408
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_CP012938 | Bovatus_RS21315 | 1 | 1200 | + | GH105 |
| CAZyme | NZ_CP012938 | Bovatus_RS21320 | 1210 | 2181 | + | CE8 |
| CAZyme | NZ_CP012938 | Bovatus_RS21325 | 2541 | 4289 | + | CE12 | CE8 |
| TF | NZ_CP012938 | Bovatus_RS21330 | 4455 | 8990 | + | HTH_AraC |
| CAZyme | NZ_CP012938 | Bovatus_RS21335 | 9135 | 10631 | - | PL1_2 |
| CAZyme | NZ_CP012938 | Bovatus_RS21340 | 10667 | 12328 | - | PL1_2 |
| CAZyme | NZ_CP012938 | Bovatus_RS21345 | 12360 | 13943 | - | PL1_2 |
| CAZyme | NZ_CP012938 | Bovatus_RS21350 | 14037 | 15665 | - | CE8 |
| pfam | NZ_CP012938 | Bovatus_RS21355 | 15750 | 17669 | - | DUF5123 |
| pfam | NZ_CP012938 | Bovatus_RS21360 | 17685 | 19592 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_CP012938 | Bovatus_RS21365 | 19618 | 22875 | - | 1.B.14.6.1 |
| TC | NZ_CP012938 | Bovatus_RS21370 | 23222 | 24016 | + | 9.B.116.3.2 |
| TF | NZ_CP012938 | Bovatus_RS21375 | 24020 | 24838 | + | LytTR |
| CAZyme | NZ_CP012938 | Bovatus_RS21380 | 24957 | 26486 | + | PL1_2 |
| NULL(UNKNOWN) | NZ_CP012938 | Bovatus_RS21385 | 26882 | 27766 | + | NULL(UNKNOWN) |
| pfam | NZ_CP012938 | Bovatus_RS21390 | 27779 | 29584 | + | DUF5123 |
| CAZyme | NZ_CP012938 | Bovatus_RS21395 | 29619 | 32006 | + | PL1_2 |
| TC | NZ_CP012938 | Bovatus_RS21400 | 32051 | 35263 | + | 1.B.14.6.1 |
| TC | NZ_CP012938 | Bovatus_RS21405 | 35289 | 37190 | + | 8.A.46.1.3 |
| pfam | NZ_CP012938 | Bovatus_RS21410 | 37211 | 38863 | + | DUF5123 |
| pfam | NZ_CP012938 | Bovatus_RS21415 | 38919 | 40775 | + | Mfa_like_1 |
| CAZyme | NZ_CP012938 | Bovatus_RS21420 | 40817 | 43228 | + | CE8 |
| CAZyme | NZ_CP012938 | Bovatus_RS21425 | 43254 | 44828 | + | GH28 |
| CAZyme | NZ_CP012938 | Bovatus_RS21430 | 45552 | 48143 | - | GH3 |
| CAZyme | NZ_CP012938 | Bovatus_RS21435 | 48482 | 50488 | + | CBM91 | GH43_10 |
| pfam | NZ_CP012938 | Bovatus_RS21440 | 50712 | 51479 | + | Ubie_methyltran | TehB | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TF | NZ_CP012938 | Bovatus_RS21445 | 51613 | 55953 | - | HTH_AraC | HTH_AraC |
Gene ID: Bovatus_RS21315
Type: CAZyme
Location: 1 - 1200 (+)
Type: CAZyme
Location: 1 - 1200 (+)
Gene ID: Bovatus_RS21320
Type: CAZyme
Location: 1210 - 2181 (+)
Type: CAZyme
Location: 1210 - 2181 (+)
Gene ID: Bovatus_RS21325
Type: CAZyme
Location: 2541 - 4289 (+)
Type: CAZyme
Location: 2541 - 4289 (+)
Gene ID: Bovatus_RS21330
Type: TF
Location: 4455 - 8990 (+)
Type: TF
Location: 4455 - 8990 (+)
Gene ID: Bovatus_RS21335
Type: CAZyme
Location: 9135 - 10631 (-)
Type: CAZyme
Location: 9135 - 10631 (-)
Gene ID: Bovatus_RS21340
Type: CAZyme
Location: 10667 - 12328 (-)
Type: CAZyme
Location: 10667 - 12328 (-)
Gene ID: Bovatus_RS21345
Type: CAZyme
Location: 12360 - 13943 (-)
Type: CAZyme
Location: 12360 - 13943 (-)
Gene ID: Bovatus_RS21350
Type: CAZyme
Location: 14037 - 15665 (-)
Type: CAZyme
Location: 14037 - 15665 (-)
Gene ID: Bovatus_RS21355
Type: pfam
Location: 15750 - 17669 (-)
Type: pfam
Location: 15750 - 17669 (-)
Gene ID: Bovatus_RS21360
Type: pfam
Location: 17685 - 19592 (-)
Type: pfam
Location: 17685 - 19592 (-)
Gene ID: Bovatus_RS21365
Type: TC
Location: 19618 - 22875 (-)
Type: TC
Location: 19618 - 22875 (-)
Gene ID: Bovatus_RS21370
Type: TC
Location: 23222 - 24016 (+)
Type: TC
Location: 23222 - 24016 (+)
Gene ID: Bovatus_RS21375
Type: TF
Location: 24020 - 24838 (+)
Type: TF
Location: 24020 - 24838 (+)
Gene ID: Bovatus_RS21380
Type: CAZyme
Location: 24957 - 26486 (+)
Type: CAZyme
Location: 24957 - 26486 (+)
Gene ID: Bovatus_RS21385
Type: null
Location: 26882 - 27766 (+)
Type: null
Location: 26882 - 27766 (+)
Gene ID: Bovatus_RS21390
Type: pfam
Location: 27779 - 29584 (+)
Type: pfam
Location: 27779 - 29584 (+)
Gene ID: Bovatus_RS21395
Type: CAZyme
Location: 29619 - 32006 (+)
Type: CAZyme
Location: 29619 - 32006 (+)
Gene ID: Bovatus_RS21400
Type: TC
Location: 32051 - 35263 (+)
Type: TC
Location: 32051 - 35263 (+)
Gene ID: Bovatus_RS21405
Type: TC
Location: 35289 - 37190 (+)
Type: TC
Location: 35289 - 37190 (+)
Gene ID: Bovatus_RS21410
Type: pfam
Location: 37211 - 38863 (+)
Type: pfam
Location: 37211 - 38863 (+)
Gene ID: Bovatus_RS21415
Type: pfam
Location: 38919 - 40775 (+)
Type: pfam
Location: 38919 - 40775 (+)
Gene ID: Bovatus_RS21420
Type: CAZyme
Location: 40817 - 43228 (+)
Type: CAZyme
Location: 40817 - 43228 (+)
Gene ID: Bovatus_RS21425
Type: CAZyme
Location: 43254 - 44828 (+)
Type: CAZyme
Location: 43254 - 44828 (+)
Gene ID: Bovatus_RS21430
Type: CAZyme
Location: 45552 - 48143 (-)
Type: CAZyme
Location: 45552 - 48143 (-)
Gene ID: Bovatus_RS21435
Type: CAZyme
Location: 48482 - 50488 (+)
Type: CAZyme
Location: 48482 - 50488 (+)
Gene ID: Bovatus_RS21440
Type: pfam
Location: 50712 - 51479 (+)
Type: pfam
Location: 50712 - 51479 (+)
Gene ID: Bovatus_RS21445
Type: TF
Location: 51613 - 55953 (-)
Type: TF
Location: 51613 - 55953 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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