Cluster: PUL0527_HRGMv2_0156_C0
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate: beta-glucan
- Genome ID: HRGMv2_0156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3440 | 4507412 | 4509772 | - | GH3 |
| CAZyme | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3441 | 4510057 | 4511646 | + | CBM91 | GH43_12 |
| CAZyme | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3442 | 4511815 | 4513395 | + | CBM91 | GH43_12 |
| CAZyme | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3443 | 4513568 | 4515076 | + | GH5_4 |
| TC | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3444 | 4515102 | 4518275 | + | 1.B.14.6.1 |
| pfam | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3445 | 4518299 | 4519927 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3446 | 4519941 | 4521410 | + | TIG | SGBP_B_XBD |
| CAZyme | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3447 | 4521477 | 4523240 | + | GH9 |
| TF | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3448 | 4523326 | 4527345 | + | HTH_AraC | HTH_AraC |
| CAZyme | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3449 | 4527495 | 4530353 | + | GH31_4 |
| CAZyme | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3450 | 4530400 | 4532928 | + | GH2 |
| CAZyme | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3451 | 4532951 | 4535179 | + | GH3 |
| TC | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3452 | 4535335 | 4536912 | - | 9.B.174.1.1 |
| pfam | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3453 | 4536950 | 4537408 | - | CTP_transf_like |
| STP | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3454 | 4537405 | 4539282 | - | HATPase_c |
| NULL(UNKNOWN) | PUL0527_HRGMv2_0156_C0 | HRGMv2_0156_1_3455 | 4539293 | 4540429 | - | NULL(UNKNOWN) |
Gene ID: HRGMv2_0156_1_3440
Type: CAZyme
Location: 4507412 - 4509772 (-)
Type: CAZyme
Location: 4507412 - 4509772 (-)
Gene ID: HRGMv2_0156_1_3441
Type: CAZyme
Location: 4510057 - 4511646 (+)
Type: CAZyme
Location: 4510057 - 4511646 (+)
Gene ID: HRGMv2_0156_1_3442
Type: CAZyme
Location: 4511815 - 4513395 (+)
Type: CAZyme
Location: 4511815 - 4513395 (+)
Gene ID: HRGMv2_0156_1_3443
Type: CAZyme
Location: 4513568 - 4515076 (+)
Type: CAZyme
Location: 4513568 - 4515076 (+)
Gene ID: HRGMv2_0156_1_3444
Type: TC
Location: 4515102 - 4518275 (+)
Type: TC
Location: 4515102 - 4518275 (+)
Gene ID: HRGMv2_0156_1_3445
Type: pfam
Location: 4518299 - 4519927 (+)
Type: pfam
Location: 4518299 - 4519927 (+)
Gene ID: HRGMv2_0156_1_3446
Type: pfam
Location: 4519941 - 4521410 (+)
Type: pfam
Location: 4519941 - 4521410 (+)
Gene ID: HRGMv2_0156_1_3447
Type: CAZyme
Location: 4521477 - 4523240 (+)
Type: CAZyme
Location: 4521477 - 4523240 (+)
Gene ID: HRGMv2_0156_1_3448
Type: TF
Location: 4523326 - 4527345 (+)
Type: TF
Location: 4523326 - 4527345 (+)
Gene ID: HRGMv2_0156_1_3449
Type: CAZyme
Location: 4527495 - 4530353 (+)
Type: CAZyme
Location: 4527495 - 4530353 (+)
Gene ID: HRGMv2_0156_1_3450
Type: CAZyme
Location: 4530400 - 4532928 (+)
Type: CAZyme
Location: 4530400 - 4532928 (+)
Gene ID: HRGMv2_0156_1_3451
Type: CAZyme
Location: 4532951 - 4535179 (+)
Type: CAZyme
Location: 4532951 - 4535179 (+)
Gene ID: HRGMv2_0156_1_3452
Type: TC
Location: 4535335 - 4536912 (-)
Type: TC
Location: 4535335 - 4536912 (-)
Gene ID: HRGMv2_0156_1_3453
Type: pfam
Location: 4536950 - 4537408 (-)
Type: pfam
Location: 4536950 - 4537408 (-)
Gene ID: HRGMv2_0156_1_3454
Type: STP
Location: 4537405 - 4539282 (-)
Type: STP
Location: 4537405 - 4539282 (-)
Gene ID: HRGMv2_0156_1_3455
Type: null
Location: 4539293 - 4540429 (-)
Type: null
Location: 4539293 - 4540429 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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