Cluster: PUL0519_HRGMv2_2501_C0
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2501
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0519_HRGMv2_2501_C0 | HRGMv2_2501_10_12 | 12195 | 14453 | - | GT35 |
| CAZyme | PUL0519_HRGMv2_2501_C0 | HRGMv2_2501_10_13 | 14478 | 15995 | - | GH77 |
| TC | PUL0519_HRGMv2_2501_C0 | HRGMv2_2501_10_14 | 16468 | 17736 | + | 3.A.1.1.26 |
| TC | PUL0519_HRGMv2_2501_C0 | HRGMv2_2501_10_15 | 17861 | 19153 | + | 3.A.1.1.26 |
| TC | PUL0519_HRGMv2_2501_C0 | HRGMv2_2501_10_16 | 19155 | 19997 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | PUL0519_HRGMv2_2501_C0 | HRGMv2_2501_10_17 | 20171 | 20977 | + | NULL(UNKNOWN) |
| TF | PUL0519_HRGMv2_2501_C0 | HRGMv2_2501_10_18 | 20987 | 21973 | + | LacI |
Gene ID: HRGMv2_2501_10_12
Type: CAZyme
Location: 12195 - 14453 (-)
Type: CAZyme
Location: 12195 - 14453 (-)
Gene ID: HRGMv2_2501_10_13
Type: CAZyme
Location: 14478 - 15995 (-)
Type: CAZyme
Location: 14478 - 15995 (-)
Gene ID: HRGMv2_2501_10_14
Type: TC
Location: 16468 - 17736 (+)
Type: TC
Location: 16468 - 17736 (+)
Gene ID: HRGMv2_2501_10_15
Type: TC
Location: 17861 - 19153 (+)
Type: TC
Location: 17861 - 19153 (+)
Gene ID: HRGMv2_2501_10_16
Type: TC
Location: 19155 - 19997 (+)
Type: TC
Location: 19155 - 19997 (+)
Gene ID: HRGMv2_2501_10_17
Type: null
Location: 20171 - 20977 (+)
Type: null
Location: 20171 - 20977 (+)
Gene ID: HRGMv2_2501_10_18
Type: TF
Location: 20987 - 21973 (+)
Type: TF
Location: 20987 - 21973 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BW
Gene Composition
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