Cluster: PUL0488
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate: beta-mannan
- Genome ID: PUL0488
- CGC Family ID: CGCFAM_00577
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_009441 | FJOH_RS25560 | 1 | 969 | - | GH5_2 |
| CAZyme | NC_009441 | FJOH_RS25565 | 980 | 2215 | - | GH27 |
| NULL(UNKNOWN) | NC_009441 | FJOH_RS25570 | 2334 | 3296 | - | NULL(UNKNOWN) |
| pfam | NC_009441 | FJOH_RS25575 | 3492 | 4529 | - | TIG |
| pfam | NC_009441 | FJOH_RS25580 | 4549 | 6147 | - | SusD_RagB | SusD-like_3 |
| TC | NC_009441 | FJOH_RS25585 | 6161 | 9340 | - | 1.B.14.6.1 |
| TF | NC_009441 | FJOH_RS25590 | 9664 | 10542 | - | HTH_AraC | HTH_AraC |
| CAZyme | NC_009441 | FJOH_RS25595 | 10849 | 11979 | + | GH26 |
| TC | NC_009441 | FJOH_RS25600 | 12024 | 13415 | + | 2.A.2.3.6 |
| CAZyme | NC_009441 | FJOH_RS25605 | 13447 | 14637 | + | GH130_1 |
| pfam | NC_009441 | FJOH_RS25610 | 14644 | 15834 | + | GlcNAc_2-epim |
| CAZyme | NC_009441 | FJOH_RS25615 | 15840 | 17069 | + | GH26 |
| CAZyme | NC_009441 | FJOH_RS25620 | 17217 | 18506 | + | GH5_7 |
| CAZyme | NC_009441 | FJOH_RS25625 | 18781 | 20760 | + | GH97 |
Gene ID: FJOH_RS25560
Type: CAZyme
Location: 1 - 969 (-)
Type: CAZyme
Location: 1 - 969 (-)
Gene ID: FJOH_RS25565
Type: CAZyme
Location: 980 - 2215 (-)
Type: CAZyme
Location: 980 - 2215 (-)
Gene ID: FJOH_RS25570
Type: null
Location: 2334 - 3296 (-)
Type: null
Location: 2334 - 3296 (-)
Gene ID: FJOH_RS25575
Type: pfam
Location: 3492 - 4529 (-)
Type: pfam
Location: 3492 - 4529 (-)
Gene ID: FJOH_RS25580
Type: pfam
Location: 4549 - 6147 (-)
Type: pfam
Location: 4549 - 6147 (-)
Gene ID: FJOH_RS25585
Type: TC
Location: 6161 - 9340 (-)
Type: TC
Location: 6161 - 9340 (-)
Gene ID: FJOH_RS25590
Type: TF
Location: 9664 - 10542 (-)
Type: TF
Location: 9664 - 10542 (-)
Gene ID: FJOH_RS25595
Type: CAZyme
Location: 10849 - 11979 (+)
Type: CAZyme
Location: 10849 - 11979 (+)
Gene ID: FJOH_RS25600
Type: TC
Location: 12024 - 13415 (+)
Type: TC
Location: 12024 - 13415 (+)
Gene ID: FJOH_RS25605
Type: CAZyme
Location: 13447 - 14637 (+)
Type: CAZyme
Location: 13447 - 14637 (+)
Gene ID: FJOH_RS25610
Type: pfam
Location: 14644 - 15834 (+)
Type: pfam
Location: 14644 - 15834 (+)
Gene ID: FJOH_RS25615
Type: CAZyme
Location: 15840 - 17069 (+)
Type: CAZyme
Location: 15840 - 17069 (+)
Gene ID: FJOH_RS25620
Type: CAZyme
Location: 17217 - 18506 (+)
Type: CAZyme
Location: 17217 - 18506 (+)
Gene ID: FJOH_RS25625
Type: CAZyme
Location: 18781 - 20760 (+)
Type: CAZyme
Location: 18781 - 20760 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium johnsoniae
Gene Composition
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