Cluster: PUL0484
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 8
- Substrate: pectin
- Genome ID: PUL0484
- CGC Family ID: CGCFAM_00821
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NC_009441 | FJOH_RS21960 | 1 | 657 | - | CE12 |
| CAZyme | NC_009441 | FJOH_RS21965 | 758 | 2104 | - | GH28 |
| CAZyme | NC_009441 | FJOH_RS21970 | 2230 | 4230 | - | CE8 | PL10_1 |
| CAZyme | NC_009441 | FJOH_RS21975 | 4240 | 5838 | - | CBM91 | GH43_10 |
| CAZyme | NC_009441 | FJOH_RS21980 | 6009 | 7229 | - | GH105 |
| CAZyme | NC_009441 | FJOH_RS21985 | 7252 | 8457 | - | GH105 |
| CAZyme | NC_009441 | FJOH_RS21990 | 8470 | 9669 | - | GH105 |
| peptidase | NC_009441 | FJOH_RS21995 | 9711 | 10667 | - | S09.UNW |
| TC | NC_009441 | FJOH_RS22000 | 10772 | 12445 | - | 8.A.46.1.6 |
| TC | NC_009441 | FJOH_RS22005 | 12458 | 15562 | - | 1.B.14.6.1 |
| CAZyme | NC_009441 | FJOH_RS22010 | 15608 | 17035 | - | GH28 |
| TF | NC_009441 | FJOH_RS22015 | 17326 | 18354 | + | LacI |
Gene ID: FJOH_RS21960
Type: CAZyme
Location: 1 - 657 (-)
Type: CAZyme
Location: 1 - 657 (-)
Gene ID: FJOH_RS21965
Type: CAZyme
Location: 758 - 2104 (-)
Type: CAZyme
Location: 758 - 2104 (-)
Gene ID: FJOH_RS21970
Type: CAZyme
Location: 2230 - 4230 (-)
Type: CAZyme
Location: 2230 - 4230 (-)
Gene ID: FJOH_RS21975
Type: CAZyme
Location: 4240 - 5838 (-)
Type: CAZyme
Location: 4240 - 5838 (-)
Gene ID: FJOH_RS21980
Type: CAZyme
Location: 6009 - 7229 (-)
Type: CAZyme
Location: 6009 - 7229 (-)
Gene ID: FJOH_RS21985
Type: CAZyme
Location: 7252 - 8457 (-)
Type: CAZyme
Location: 7252 - 8457 (-)
Gene ID: FJOH_RS21990
Type: CAZyme
Location: 8470 - 9669 (-)
Type: CAZyme
Location: 8470 - 9669 (-)
Gene ID: FJOH_RS21995
Type: peptidase
Location: 9711 - 10667 (-)
Type: peptidase
Location: 9711 - 10667 (-)
Gene ID: FJOH_RS22000
Type: TC
Location: 10772 - 12445 (-)
Type: TC
Location: 10772 - 12445 (-)
Gene ID: FJOH_RS22005
Type: TC
Location: 12458 - 15562 (-)
Type: TC
Location: 12458 - 15562 (-)
Gene ID: FJOH_RS22010
Type: CAZyme
Location: 15608 - 17035 (-)
Type: CAZyme
Location: 15608 - 17035 (-)
Gene ID: FJOH_RS22015
Type: TF
Location: 17326 - 18354 (+)
Type: TF
Location: 17326 - 18354 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium johnsoniae
Gene Composition
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